RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 ZNF512Q96ME7 567 aaPredicted RBP11.78□□□□□ -0.52
RTN1-203ENST00000395090 HAPLN3Q96S86 360 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 KRT12Q99456 494 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 LRRC1Q9BTT6 524 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 CALN1Q9BXU9 219 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 LRRC3Q9BY71 257 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 LMAN2LQ9H0V9 348 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 OSBPL2Q9H1P3 480 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 SLITRK6Q9H5Y7 841 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 DHX35Q9H5Z1 703 aaKnown RBP11.78□□□□□ -0.52
RTN1-203ENST00000395090 PRDM16Q9HAZ2 1276 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.78□□□□□ -0.52
RTN1-203ENST00000395090 GPATCH2LQ9NWQ4 482 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 COX16Q9P0S2 106 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.78□□□□□ -0.52
RTN1-203ENST00000395090 PCYOX1Q9UHG3 505 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 MKL2Q9ULH7 1088 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 CYP8B1Q9UNU6 501 aa11.78□□□□□ -0.52
RTN1-203ENST00000395090 V9GYY5 206 aaPredicted RBP11.78□□□□□ -0.52
RTN1-203ENST00000395090 CHD7Q9P2D1 2997 aa11.77□□□□□ -0.52
RTN1-203ENST00000395090 TARSL2A2RTX5 802 aaKnown RBP11.77□□□□□ -0.53
RTN1-203ENST00000395090 GNB5O14775 395 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 CST8O60676 142 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 CLASP2O75122 1294 aaKnown RBP11.77□□□□□ -0.53
RTN1-203ENST00000395090 PHF2O75151 1096 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 TBX18O95935 607 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 IGLV3-27P01718 113 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 C8AP07357 584 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 SLC2A3P11169 496 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 CCR1P32246 355 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 CHRNA3P32297 505 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 CA8P35219 290 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 RGS19P49795 217 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 KPNA1P52294 538 aaPredicted RBP11.77□□□□□ -0.53
RTN1-203ENST00000395090 ZNF135P52742 658 aaPredicted RBP11.77□□□□□ -0.53
RTN1-203ENST00000395090 RING1Q06587 406 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 TFDP2Q14188 446 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 KRT81Q14533 505 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 SUZ12Q15022 739 aaKnown RBP11.77□□□□□ -0.53
RTN1-203ENST00000395090 LRRC14Q15048 493 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 PABPC1LQ4VXU2 614 aaKnown RBP11.77□□□□□ -0.53
RTN1-203ENST00000395090 ANKRD20A8PQ5CZ79 823 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 TEX35Q5T0J7 233 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 KAZNQ674X7 775 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 SLC9A4Q6AI14 798 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 DRICH1Q6PGQ1 229 aaPredicted RBP11.77□□□□□ -0.53
RTN1-203ENST00000395090 TADA2BQ86TJ2 420 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 PYROXD2Q8N2H3 581 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 PQLC3Q8N755 202 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 GALNT11Q8NCW6 608 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 PCDH19Q8TAB3 1148 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 MAGOHBQ96A72 148 aaKnown RBP11.77□□□□□ -0.53
RTN1-203ENST00000395090 DCLK3Q9C098 648 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 TKTL2Q9H0I9 626 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 DDX47Q9H0S4 455 aaKnown RBP11.77□□□□□ -0.53
RTN1-203ENST00000395090 NKX2-4Q9H2Z4 354 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 ANKZF1Q9H8Y5 726 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 TRPM5Q9NZQ8 1165 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 CWC15Q9P013 229 aaKnown RBP11.77□□□□□ -0.53
RTN1-203ENST00000395090 MARCH2Q9P0N8 246 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 NUDT5Q9UKK9 219 aa11.77□□□□□ -0.53
RTN1-203ENST00000395090 R3HDM2Q9Y2K5 976 aaKnown RBP11.77□□□□□ -0.53
RTN1-203ENST00000395090 GBF1Q92538 1859 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 TLR5O60602 858 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 DEAF1O75398 565 aaPredicted RBP11.76□□□□□ -0.53
RTN1-203ENST00000395090 TUBBP07437 444 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 HOXA9P31269 272 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 ATP5C1P36542 298 aaKnown RBP11.76□□□□□ -0.53
RTN1-203ENST00000395090 COILP38432 576 aaPredicted RBP11.76□□□□□ -0.53
RTN1-203ENST00000395090 FNTAP49354 379 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 TAF12Q16514 161 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 PPP6R3Q5H9R7 873 aaPredicted RBP11.76□□□□□ -0.53
RTN1-203ENST00000395090 C10orf120Q5SQS8 335 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 HECTD3Q5T447 861 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 ARTNQ5T4W7 220 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 TTC27Q6P3X3 843 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 MAATS1Q7Z4T9 603 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 KLHL7Q8IXQ5 586 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 TDHQ8IZJ6 230 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 ZSCAN1Q8NBB4 408 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 CCDC26Q8TAB7 109 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 C1orf54Q8WWF1 131 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 SLCO2A1Q92959 643 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 FCRL2Q96LA5 508 aaPredicted RBP11.76□□□□□ -0.53
RTN1-203ENST00000395090 C1orf74Q96LT6 269 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 RUNDC3BQ96NL0 473 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 CSPG4P5Q96PW8 444 aa11.76□□□□□ -0.53
RTN1-203ENST00000395090 MAK16Q9BXY0 300 aaKnown RBP11.76□□□□□ -0.53
RTN1-203ENST00000395090 FRMD8P1Q9BZ68 369 aaPredicted RBP11.76□□□□□ -0.53
RTN1-203ENST00000395090 FAM72CH0Y354 149 aa11.75□□□□□ -0.53
RTN1-203ENST00000395090 APOC4-APOC2K7ER74 178 aa11.75□□□□□ -0.53
RTN1-203ENST00000395090 DYNC1I1O14576 645 aa11.75□□□□□ -0.53
RTN1-203ENST00000395090 MSI1O43347 362 aaKnown RBP11.75□□□□□ -0.53
RTN1-203ENST00000395090 PAPLNO95428 1278 aa11.75□□□□□ -0.53
RTN1-203ENST00000395090 OAS1P00973 400 aaKnown RBP11.75□□□□□ -0.53
RTN1-203ENST00000395090 APOC2P02655 101 aa11.75□□□□□ -0.53
RTN1-203ENST00000395090 LRG1P02750 347 aa11.75□□□□□ -0.53
RTN1-203ENST00000395090 EPHA5P54756 1037 aa11.75□□□□□ -0.53
RTN1-203ENST00000395090 MLLT6P55198 1093 aaPredicted RBP11.75□□□□□ -0.53
RTN1-203ENST00000395090 TBX4P57082 545 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms