RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 RIMS3Q9UJD0 308 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 DMTF1Q9Y222 760 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 KIAA1217Q5T5P2 1943 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 TRIP11Q15643 1979 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 ARHGEF37A1IGU5 675 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 KCNU1A8MYU2 1149 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 C9JVG2 144 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 CASQ2O14958 399 aaPredicted RBP14.61□□□□□ -0.07
CLIP2-203ENST00000395060 PENKP01210 267 aaPredicted RBP14.61□□□□□ -0.07
CLIP2-203ENST00000395060 STAG3L1P0CL83 205 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 CDH2P19022 906 aaPredicted RBP14.61□□□□□ -0.07
CLIP2-203ENST00000395060 GRIA4P48058 902 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 ENTPD1P49961 510 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 DCTN2Q13561 401 aaKnown RBP14.61□□□□□ -0.07
CLIP2-203ENST00000395060 HSDL1Q3SXM5 330 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 GLRA4Q5JXX5 417 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 CERCAMQ5T4B2 595 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 MPZL3Q6UWV2 235 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 RNF135Q8IUD6 432 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 CSPG4P5Q96PW8 444 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 GGA3Q9NZ52 723 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 SFMBT1Q9UHJ3 866 aa14.61□□□□□ -0.07
CLIP2-203ENST00000395060 C2P06681 752 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 THRAP10827 490 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 UGT1A6P19224 532 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 ZNF423Q2M1K9 1284 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 ZPBP2Q6X784 338 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 TTC30AQ86WT1 665 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 RNF169Q8NCN4 708 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 KBTBD7Q8WVZ9 684 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 CERS2Q96G23 380 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 SLC29A1Q99808 456 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 RBM38Q9H0Z9 239 aaKnown RBP14.6□□□□□ -0.07
CLIP2-203ENST00000395060 NOL11Q9H8H0 719 aaKnown RBP14.6□□□□□ -0.07
CLIP2-203ENST00000395060 CYP4F12Q9HCS2 524 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 IARS2Q9NSE4 1012 aaKnown RBP14.6□□□□□ -0.07
CLIP2-203ENST00000395060 MTMR10Q9NXD2 777 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 ZNF214Q9UL59 606 aaPredicted RBP14.6□□□□□ -0.07
CLIP2-203ENST00000395060 PCDHB12Q9Y5F1 795 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 FAM149AA5PLN7 773 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 SAC3D1A6NKF1 404 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 PPEF2O14830 753 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 STRNO43815 780 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 HNRNPLP14866 589 aaKnown RBP eCLIP14.6□□□□□ -0.07
CLIP2-203ENST00000395060 TSPAN8P19075 237 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 SERPINB8P50452 374 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 NIPAL4Q0D2K0 466 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 NME3Q13232 169 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 SEL1L3Q68CR1 1132 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 MCUQ8NE86 351 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 LRRC39Q96DD0 335 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 P2RY11Q96G91 374 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 ILKAPQ9H0C8 392 aaPredicted RBP14.6□□□□□ -0.07
CLIP2-203ENST00000395060 R3HDMLQ9H3Y0 253 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 NMRAL1Q9HBL8 299 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 MKS1Q9NXB0 559 aa14.6□□□□□ -0.07
CLIP2-203ENST00000395060 ARHGAP10A1A4S6 786 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 RGSL1A5PLK6 1076 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 DENRO43583 198 aaKnown RBP14.59□□□□□ -0.07
CLIP2-203ENST00000395060 TRIM13O60858 407 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 VAPBO95292 243 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 PFKMP08237 780 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 ME2P23368 584 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 MAGEA3P43357 314 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 NUMBP49757 651 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 PLK1P53350 603 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 AP3M2P53677 418 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 PTK2BQ14289 1009 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 PDK2Q15119 407 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 DGKDQ16760 1214 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 ANKRD23Q86SG2 305 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 SIKE1Q9BRV8 207 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 TRIM8Q9BZR9 551 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 GTSE1Q9NYZ3 720 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 NDUFA13Q9P0J0 144 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 KLHL8Q9P2G9 620 aaPredicted RBP14.59□□□□□ -0.07
CLIP2-203ENST00000395060 RNF11Q9Y3C5 154 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 CEPT1Q9Y6K0 416 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 NEMP2A6NFY4 417 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 G3V2L1 256 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 MAFGO15525 162 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 CCDC130P13994 396 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 GP5P40197 560 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 NDST2P52849 883 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 LPIN1Q14693 890 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 DBN1Q16643 649 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 SOWAHAQ2M3V2 549 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 ZNF280DQ6N043 979 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 C16orf89Q6UX73 402 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 CLVS1Q8IUQ0 354 aaPredicted RBP14.59□□□□□ -0.07
CLIP2-203ENST00000395060 KCTD4Q8WVF5 259 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 COPS5Q92905 334 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 CDHR1Q96JP9 859 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 RPL10LQ96L21 214 aaKnown RBP14.59□□□□□ -0.07
CLIP2-203ENST00000395060 FAM210AQ96ND0 272 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 MRPL45Q9BRJ2 306 aaKnown RBP14.59□□□□□ -0.07
CLIP2-203ENST00000395060 DPEP3Q9H4B8 488 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 TMEM134Q9H6X4 195 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 CHRAC1Q9NRG0 131 aa14.59□□□□□ -0.07
CLIP2-203ENST00000395060 CCDC167Q9P0B6 97 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms