RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 LIMK1P53667 647 aa31.57■■■□□ 2.64
CMTM4-202ENST00000394106 RPL7AP62424 266 aaKnown RBP31.57■■■□□ 2.64
CMTM4-202ENST00000394106 ACCSLQ4AC99 568 aa31.57■■■□□ 2.64
CMTM4-202ENST00000394106 PEAR1Q5VY43 1037 aaPredicted RBP31.57■■■□□ 2.64
CMTM4-202ENST00000394106 IL31Q6EBC2 164 aa31.57■■■□□ 2.64
CMTM4-202ENST00000394106 PPP1R2P3Q6NXS1 205 aa31.57■■■□□ 2.64
CMTM4-202ENST00000394106 DCUN1D2Q6PH85 259 aa31.57■■■□□ 2.64
CMTM4-202ENST00000394106 LRSAM1Q6UWE0 723 aa31.57■■■□□ 2.64
CMTM4-202ENST00000394106 SETD3Q86TU7 594 aaPredicted RBP31.57■■■□□ 2.64
CMTM4-202ENST00000394106 CCDC185Q8N715 623 aa31.57■■■□□ 2.64
CMTM4-202ENST00000394106 GANCQ8TET4 914 aa31.57■■■□□ 2.64
CMTM4-202ENST00000394106 ZYG11BQ9C0D3 744 aa31.57■■■□□ 2.64
CMTM4-202ENST00000394106 IFNKQ9P0W0 207 aa31.57■■■□□ 2.64
CMTM4-202ENST00000394106 CCP110O43303 1012 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 VAV1P15498 845 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 MAOBP27338 520 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 PBX1P40424 430 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 ZNF143P52747 638 aaPredicted RBP31.56■■■□□ 2.64
CMTM4-202ENST00000394106 DUOXA1Q1HG43 343 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 WDR45BQ5MNZ6 344 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 ARTNQ5T4W7 220 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 C6orf118Q5T5N4 469 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 DNAAF5Q86Y56 855 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 MMAAQ8IVH4 418 aaKnown RBP31.56■■■□□ 2.64
CMTM4-202ENST00000394106 STK40Q8N2I9 435 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 CADM4Q8NFZ8 388 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 PTPRN2Q92932 1015 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 PABPC3Q9H361 631 aaKnown RBP31.56■■■□□ 2.64
CMTM4-202ENST00000394106 OR12D3Q9UGF7 316 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 DOCK4Q8N1I0 1966 aa31.56■■■□□ 2.64
CMTM4-202ENST00000394106 C7P10643 843 aa31.55■■■□□ 2.64
CMTM4-202ENST00000394106 ACSL1P33121 698 aa31.55■■■□□ 2.64
CMTM4-202ENST00000394106 PPP1R15BQ5SWA1 713 aa31.55■■■□□ 2.64
CMTM4-202ENST00000394106 CEP76Q8TAP6 659 aa31.55■■■□□ 2.64
CMTM4-202ENST00000394106 VCPIP1Q96JH7 1222 aa31.55■■■□□ 2.64
CMTM4-202ENST00000394106 A0A0D9SEW6 157 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 ATMINO43313 823 aaPredicted RBP31.54■■■□□ 2.64
CMTM4-202ENST00000394106 SNAP91O60641 907 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 PSMD8P48556 350 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 KRT83P78385 493 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 CST6Q15828 149 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 DCAF12L1Q5VU92 463 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 RWDD4Q6NW29 188 aaKnown RBP31.54■■■□□ 2.64
CMTM4-202ENST00000394106 SCYL2Q6P3W7 929 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 SLC23A3Q6PIS1 610 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 RABEPKQ7Z6M1 372 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 DRC7Q8IY82 874 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 CPLX3Q8WVH0 158 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 FAM129BQ96TA1 746 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 PSMB7Q99436 277 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 C2orf49Q9BVC5 232 aaPredicted RBP31.54■■■□□ 2.64
CMTM4-202ENST00000394106 MAGEB5Q9BZ81 275 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 BTBD1Q9H0C5 482 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 FSCN3Q9NQT6 498 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 PPARGC1AQ9UBK2 798 aaKnown RBP31.54■■■□□ 2.64
CMTM4-202ENST00000394106 NCKAP1Q9Y2A7 1128 aa31.54■■■□□ 2.64
CMTM4-202ENST00000394106 A0A1W2PQJ5 194 aa31.53■■■□□ 2.64
CMTM4-202ENST00000394106 C4orf47A7E2U8 309 aa31.53■■■□□ 2.64
CMTM4-202ENST00000394106 DDX3XO00571 662 aaKnown RBP eCLIP31.53■■■□□ 2.647e-22■■■■■ 46.8
CMTM4-202ENST00000394106 MID1O15344 667 aa31.53■■■□□ 2.64
CMTM4-202ENST00000394106 FRS2Q8WU20 508 aa31.53■■■□□ 2.64
CMTM4-202ENST00000394106 MIR1-1HGQ9H1L0 117 aa31.53■■■□□ 2.64
CMTM4-202ENST00000394106 OSBPL2Q9H1P3 480 aa31.53■■■□□ 2.64
CMTM4-202ENST00000394106 FBXL12Q9NXK8 326 aa31.53■■■□□ 2.64
CMTM4-202ENST00000394106 VPS51Q9UID3 782 aa31.53■■■□□ 2.64
CMTM4-202ENST00000394106 SCML1Q9UN30 329 aa31.53■■■□□ 2.64
CMTM4-202ENST00000394106 SLC6A14Q9UN76 642 aa31.53■■■□□ 2.64
CMTM4-202ENST00000394106 PI4KAP42356 2102 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 METTL12A8MUP2 240 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 FAM72CH0Y354 149 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 FTLP02792 175 aaPredicted RBP31.52■■■□□ 2.64
CMTM4-202ENST00000394106 PLEKP08567 350 aaPredicted RBP31.52■■■□□ 2.64
CMTM4-202ENST00000394106 SLC8A1P32418 973 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 MAMLD1Q13495 774 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 ELAVL3Q14576 367 aaKnown RBP31.52■■■□□ 2.64
CMTM4-202ENST00000394106 DLG2Q15700 870 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 TDRD12Q587J7 1177 aaKnown RBP31.52■■■□□ 2.64
CMTM4-202ENST00000394106 FAM72AQ5TYM5 149 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 FAM72DQ6L9T8 149 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 SLFN11Q7Z7L1 901 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 FAM72BQ86X60 149 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 OR7D4Q8NG98 312 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 SNX19Q92543 992 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 NTAN1Q96AB6 310 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 CNPY3Q9BT09 278 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 SPON2Q9BUD6 331 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 C6orf106Q9H6K1 298 aaPredicted RBP31.52■■■□□ 2.64
CMTM4-202ENST00000394106 TMEM9BQ9NQ34 198 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 PARVAQ9NVD7 372 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 ZNF212Q9UDV6 495 aa31.52■■■□□ 2.64
CMTM4-202ENST00000394106 NUMA1Q14980 2115 aa31.51■■■□□ 2.64
CMTM4-202ENST00000394106 ATP9BO43861 1147 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 SEMA4FO95754 770 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 SERPINF2P08697 491 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 GNSP15586 552 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 DESP17661 470 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 ENGP17813 658 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 MAPK8P45983 427 aa31.51■■■□□ 2.63
CMTM4-202ENST00000394106 VASPP50552 380 aaPredicted RBP31.51■■■□□ 2.63
CMTM4-202ENST00000394106 OGDHQ02218 1023 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms