RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TBC1D3GQ6DHY5 549 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 TBC1D3CQ6IPX1 549 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 CXorf57Q6NSI4 855 aaKnown RBP15.85■□□□□ 0.13
CHMP3-202ENST00000393773 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.85■□□□□ 0.13
CHMP3-202ENST00000393773 TBC1D3Q8IZP1 549 aaPredicted RBP15.85■□□□□ 0.13
CHMP3-202ENST00000393773 PPM1KQ8N3J5 372 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 PRMT1Q99873 361 aaKnown RBP15.85■□□□□ 0.13
CHMP3-202ENST00000393773 KDM4CQ9H3R0 1056 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 RMND1Q9NWS8 449 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 TJP2Q9UDY2 1190 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 SARDHQ9UL12 918 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 CLCA2Q9UQC9 943 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 DMTF1Q9Y222 760 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 TRPM6Q9BX84 2022 aa15.84■□□□□ 0.13
CHMP3-202ENST00000393773 TEX51A0A1B0GUA7 166 aa15.84■□□□□ 0.13
CHMP3-202ENST00000393773 TRIM38O00635 465 aa15.84■□□□□ 0.13
CHMP3-202ENST00000393773 NUDT1P36639 197 aa15.84■□□□□ 0.13
CHMP3-202ENST00000393773 VASPP50552 380 aaPredicted RBP15.84■□□□□ 0.13
CHMP3-202ENST00000393773 PLK1P53350 603 aa15.84■□□□□ 0.13
CHMP3-202ENST00000393773 OVGP1Q12889 678 aa15.84■□□□□ 0.13
CHMP3-202ENST00000393773 ZC3H12AQ5D1E8 599 aaKnown RBP15.84■□□□□ 0.13
CHMP3-202ENST00000393773 ARHGEF19Q8IW93 802 aa15.84■□□□□ 0.13
CHMP3-202ENST00000393773 SPACA3Q8IXA5 215 aa15.84■□□□□ 0.13
CHMP3-202ENST00000393773 CCAR2Q8N163 923 aaKnown RBP15.84■□□□□ 0.13
CHMP3-202ENST00000393773 ZNF843Q8N446 348 aa15.84■□□□□ 0.13
CHMP3-202ENST00000393773 FGF11Q92914 225 aa15.84■□□□□ 0.13
CHMP3-202ENST00000393773 BTN2A3PQ96KV6 586 aa15.84■□□□□ 0.13
CHMP3-202ENST00000393773 CA5BQ9Y2D0 317 aa15.84■□□□□ 0.13
CHMP3-202ENST00000393773 A0A1B0GVM2 712 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 TCAF2A6NFQ2 919 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 F5H5T6 163 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 SIGLEC6O43699 453 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 TRUB2O95900 331 aaKnown RBP15.83■□□□□ 0.12
CHMP3-202ENST00000393773 TAS2R38P59533 333 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 GCNT1Q02742 428 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 CENPCQ03188 943 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 SULT2A1Q06520 285 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 CNTN1Q12860 1018 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 TTC39BQ5VTQ0 682 aaPredicted RBP15.83■□□□□ 0.12
CHMP3-202ENST00000393773 DENND1BQ6P3S1 775 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 GPR155Q7Z3F1 870 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 PRPF39Q86UA1 669 aaKnown RBP15.83■□□□□ 0.12
CHMP3-202ENST00000393773 TMEM145Q8NBT3 493 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 OR52K2Q8NGK3 314 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 SPATA20Q8TB22 786 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 OR8D1Q8WZ84 308 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 ALG14Q96F25 216 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 KREMEN1Q96MU8 473 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 GSDMAQ96QA5 445 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 TRIM62Q9BVG3 475 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 SLC4A5Q9BY07 1137 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 SCAND2PQ9GZW5 306 aaPredicted RBP15.83■□□□□ 0.12
CHMP3-202ENST00000393773 ST7Q9NRC1 585 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 CNTN6Q9UQ52 1028 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 PCDHB1Q9Y5F3 818 aa15.83■□□□□ 0.12
CHMP3-202ENST00000393773 KCNU1A8MYU2 1149 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 E5RJQ4 531 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 ALOX15BO15296 676 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 ATP9BO43861 1147 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 MAGEC1O60732 1142 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 ACTN2P35609 894 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 ACADSBP45954 432 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 IRAK1P51617 712 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 CCDC173Q0VFZ6 552 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 ZNF211Q13398 564 aaPredicted RBP15.82■□□□□ 0.12
CHMP3-202ENST00000393773 MEA1Q16626 185 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 SETMARQ53H47 684 aaPredicted RBP15.82■□□□□ 0.12
CHMP3-202ENST00000393773 Q6ZVU0 165 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 RRAGAQ7L523 313 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 DSG4Q86SJ6 1040 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 FMR1NBQ8N0W7 255 aaPredicted RBP15.82■□□□□ 0.12
CHMP3-202ENST00000393773 SLC25A45Q8N413 288 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 OR4C6Q8NH72 309 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 STK32AQ8WU08 396 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 POPDC2Q9HBU9 364 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 METTL14Q9HCE5 456 aaKnown RBP15.82■□□□□ 0.12
CHMP3-202ENST00000393773 PREBQ9HCU5 417 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 PPM1HQ9ULR3 514 aa15.82■□□□□ 0.12
CHMP3-202ENST00000393773 PRAMEF26H0Y7S4 382 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 CAPN9O14815 690 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 GIMD1P0DJR0 217 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 NNMTP40261 264 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 CXADRP78310 365 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 KIF26BQ2KJY2 2108 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 POM121L1PQ3SYA9 428 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 RABGAP1LQ5R372 815 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 PIP5KL1Q5T9C9 394 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 FAM46CQ5VWP2 391 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 CDCP2Q5VXM1 449 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 KDM7AQ6ZMT4 941 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 ATP6V0D2Q8N8Y2 350 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 ERCC4Q92889 916 aaPredicted RBP15.81■□□□□ 0.12
CHMP3-202ENST00000393773 CEP63Q96MT8 703 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 CAAP1Q9H8G2 361 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 GDPD2Q9HCC8 539 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 UCKL1Q9NWZ5 548 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 OR51B4Q9Y5P0 310 aa15.81■□□□□ 0.12
CHMP3-202ENST00000393773 CHD5Q8TDI0 1954 aa15.8■□□□□ 0.12
CHMP3-202ENST00000393773 C1QTNF3-AMACRE9PGA6 284 aa15.8■□□□□ 0.12
CHMP3-202ENST00000393773 MCF2LO15068 1137 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms