RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 AS3MTQ9HBK9 375 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ZFYVE28Q9HCC9 887 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 MAN1C1Q9NR34 630 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 GPATCH2Q9NW75 528 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SH3BGRL2Q9UJC5 107 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CA5BQ9Y2D0 317 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 MTF2Q9Y483 593 aaPredicted RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 AP4B1Q9Y6B7 739 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SLC30A1Q9Y6M5 507 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 NCOA2Q15596 1464 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SMIM30A4D0T7 59 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 NPIPA2E9PIF3 369 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 NPIPA5E9PKD4 350 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 NPIPA3F8WFD2 350 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 MATN2O00339 956 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 TRIM38O00635 465 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 FOXO3O43524 673 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RTN2O75298 545 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CSF1RP07333 972 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RHOP08100 348 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PDIA3P30101 505 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 GNA15P30679 374 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PRCPP42785 496 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SNRPD2P62316 118 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 GNA12Q03113 381 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ZNF155Q12901 538 aaPredicted RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 ILF2Q12905 390 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 DRAP1Q14919 205 aaPredicted RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 PHKG1Q16816 387 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ANKDD1AQ495B1 522 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 C11orf63Q6NUN7 778 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 FAM171BQ6P995 826 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PLET1Q6UQ28 207 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CRTC3Q6UUV7 619 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ARHGAP36Q6ZRI8 547 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CXXC5Q7LFL8 322 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 PIWIL4Q7Z3Z4 852 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 HAUS6Q7Z4H7 955 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 DNAAF5Q86Y56 855 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SEPT12Q8IYM1 358 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CYP4X1Q8N118 509 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 FBXW8Q8N3Y1 598 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SCAIQ8N9R8 606 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ZNF333Q96JL9 665 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 EXOC2Q96KP1 924 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 VPS35Q96QK1 796 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 CLCC1Q96S66 551 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PCDH18Q9HCL0 1135 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RASSF1Q9NS23 344 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 TMEM45AQ9NWC5 275 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 GFOD1Q9NXC2 390 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 TRPS1Q9UHF7 1281 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 NPIPA1Q9UND3 350 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PCDHGA11Q9Y5H2 935 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ERICH3Q5RHP9 1530 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 IL16Q14005 1332 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PDS5AQ29RF7 1337 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 CCDC141Q6ZP82 1450 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 A0A0A6YYH2 397 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PNMA6EA0A0J9YXQ4 647 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 GNG14A0A1W2PPG7 69 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 LCHNA4D1U4 455 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 A6NJ64 397 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 J3QRK9 145 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 E2F3O00716 465 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 IRF6O14896 467 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PLD2O14939 933 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 INPPL1O15357 1258 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RNMTO43148 476 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 CYP26A1O43174 497 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 NDUFS3O75489 264 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 NUDT14O95848 222 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 TTLL1O95922 423 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 POLR2MP0CAP2 368 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 MYBP10242 640 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ZNF12P17014 697 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RPS3P23396 243 aaKnown RBP eCLIP3.32□□□□□ -1.88
PHF3-202ENST00000393387 VAMP1P23763 118 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 GRIA3P42263 894 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 GUCA1AP43080 201 aaPredicted RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 TTLL4Q14679 1199 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 STK11Q15831 433 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 VPS72Q15906 364 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PRAMEF17Q5VTA0 474 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RAP1GAP2Q684P5 730 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 SLC16A9Q7RTY1 509 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 ATG9AQ7Z3C6 839 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 NET1Q7Z628 596 aaPredicted RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 VTCN1Q7Z7D3 282 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 RAVER1Q8IY67 606 aaKnown RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 SMYD1Q8NB12 490 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 FBXO36Q8NEA4 188 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 PIK3C3Q8NEB9 887 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 KBTBD8Q8NFY9 601 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 USP7Q93009 1102 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 COA7Q96BR5 231 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 FBXL8Q96CD0 374 aa3.32□□□□□ -1.88
PHF3-202ENST00000393387 AURKBQ96GD4 344 aaPredicted RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 RPRD1AQ96P16 312 aaPredicted RBP3.32□□□□□ -1.88
PHF3-202ENST00000393387 MTMR12Q9C0I1 747 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms