RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 SMCR8Q8TEV9 937 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZFPM2Q8WW38 1151 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PTP4A1Q93096 173 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 SCAMP4Q969E2 229 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 CCDC47Q96A33 483 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 SDCCAG3Q96C92 435 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 COQ8BQ96D53 544 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 VCPIP1Q96JH7 1222 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 RITA1Q96K30 269 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 TSGA13Q96PP4 275 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PPP1R10Q96QC0 940 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 SPAG5Q96R06 1193 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 NR1H4Q96RI1 486 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 FNBP1Q96RU3 617 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 ABHD1Q96SE0 405 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 SLX1AQ9BQ83 275 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PI4K2AQ9BTU6 479 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 FTOQ9C0B1 505 aaKnown RBP eCLIP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 MS4A7Q9GZW8 240 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 C2orf40Q9H1Z8 148 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PLEKHA2Q9HB19 425 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 A1CFQ9NQ94 594 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 PDGFCQ9NRA1 345 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 ELOVL5Q9NYP7 299 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 DNMT3BQ9UBC3 853 aaKnown RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 CORO1CQ9ULV4 474 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 DERAQ9Y315 318 aa2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZFP37Q9Y6Q3 630 aaPredicted RBP2.34□□□□□ -2.03
SNORA40.19-201ENST00000390846 LY6G6EA0A0G2JKS1 128 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 A0A1W2PQM1 296 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 TCRBV5S1A1TA0A578 114 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 FAM90A7PA6NKC0 464 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 TRIM64CA6NLI5 447 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 FAM90A22PA8MWA6 464 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 FAM90A12PA8MX19 464 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 FAM90A23PA8MXZ1 464 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 BTBD18B2RXH4 712 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 E5RJQ4 531 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 LDLRAD4O15165 306 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 IPO8O15397 1037 aaKnown RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 FMO6PO60774 539 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 SRGAP2O75044 1071 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 CBFA2T3O75081 653 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 PSMD10O75832 226 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 RASSF9O75901 435 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 HEXIM1O94992 359 aaKnown RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 KIF20AO95235 890 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 CER1O95813 267 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 IL6RP08887 468 aaPredicted RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 FTH1P19P0C7X4 201 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ATP6V1B1P15313 513 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 HOXB6P17509 224 aaKnown RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 KLRC1P26715 233 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ACVR2AP27037 513 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 NTSR1P30989 418 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 AKT1P31749 480 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 HPDP32754 393 aaPredicted RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 PBX3P40426 434 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 KCNJ5P48544 419 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 HSD17B4P51659 736 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ADARP55265 1226 aaKnown RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 PSMC1P62191 440 aaKnown RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 TMF1P82094 1093 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 MRPS5P82675 430 aaKnown RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 IL1RL1Q01638 556 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 FHL1Q13642 323 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 NFE2L1Q14494 772 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 LASP1Q14847 261 aaKnown RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 PSMD6Q15008 389 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 MED22Q15528 200 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ADIPOQQ15848 244 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 LEXMQ3ZCV2 418 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZNF805Q5CZA5 627 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 MPP7Q5T2T1 576 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 PRAMEF17Q5VTA0 474 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ARL6IP4Q66PJ3 421 aaKnown RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ABLIM2Q6H8Q1 611 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ANO7Q6IWH7 933 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 NAA16Q6N069 864 aaPredicted RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 MSANTD2Q6P1R3 559 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ALKBH5Q6P6C2 394 aaKnown RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 TRAT1Q6PIZ9 186 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 KIAA1324Q6UXG2 1013 aaKnown RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZNF804AQ7Z570 1209 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 GATAD2AQ86YP4 633 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ARMC8Q8IUR7 673 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ADSSL1Q8N142 457 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 GALNT16Q8N428 558 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 NRACQ8N912 160 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZNF398Q8TD17 642 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 JAKMIP2Q96AA8 810 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 FKBP10Q96AY3 582 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 C3orf49Q96BT1 292 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 CENPTQ96BT3 561 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 KTI12Q96EK9 354 aaPredicted RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 CCDC34Q96HJ3 373 aa2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 CNDP2Q96KP4 475 aaKnown RBP2.33□□□□□ -2.04
SNORA40.19-201ENST00000390846 DACH2Q96NX9 599 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms