RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 GPM6BQ13491 265 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 OLIG2Q13516 323 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 PABPC1LQ4VXU2 614 aaKnown RBP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 AFMIDQ63HM1 303 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 CENPUQ71F23 418 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 AGGF1Q8N302 714 aaeCLIP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 ELMOD1Q8N336 334 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 LZTR1Q8N653 840 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 ADAMTS19Q8TE59 1207 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 PLD4Q96BZ4 506 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 HMCESQ96FZ2 354 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 SERPINB12Q96P63 405 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 FERMT1Q9BQL6 677 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 FOXP3Q9BZS1 431 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 PIH1D1Q9NWS0 290 aaKnown RBP12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 ZNF212Q9UDV6 495 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 CPQQ9Y646 472 aa12.49□□□□□ -0.41
SPTBN1-203ENST00000389980 ATG2AQ2TAZ0 1938 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 NDC80O14777 642 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 ALOX15BO15296 676 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 CLASP2O75122 1294 aaKnown RBP12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 RB1P06400 928 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 SLCO1A2P46721 670 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 GTF2A1P52655 376 aaPredicted RBP12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 SEMA5AQ13591 1074 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 SPARCL1Q14515 664 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 KRT71Q3SY84 523 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 ADGRD2Q7Z7M1 963 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 CAND1Q86VP6 1230 aaKnown RBP12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 IGDCC3Q8IVU1 814 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 EPS8L3Q8TE67 593 aaKnown RBP12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 TCEAL4Q96EI5 215 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 PRICKLE1Q96MT3 831 aaPredicted RBP12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 GORASP1Q9BQQ3 440 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 BRD8Q9H0E9 1235 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 SMG9Q9H0W8 520 aaKnown RBP12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 TTLL3Q9Y4R7 772 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 ZFP37Q9Y6Q3 630 aaPredicted RBP12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 PRRC2BQ5JSZ5 2229 aaKnown RBP12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 EYSQ5T1H1 3165 aa12.48□□□□□ -0.41
SPTBN1-203ENST00000389980 TLDC2A0PJX2 215 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 RASA4BC9J798 803 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 J3KR12 359 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 RASA4O43374 803 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 CKMP06732 381 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 OR1E1P30953 314 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 MAGEA9P43362 315 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 LONRF1Q17RB8 773 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 TEX44Q53QW1 395 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 C4orf22Q6V702 233 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 ZNF534Q76KX8 674 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 ZNF354CQ86Y25 554 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 RELL1Q8IUW5 271 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 PDIK1LQ8N165 341 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 UMODL1-AS1Q8N2C9 162 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 CNTD1Q8N815 330 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 FBXO36Q8NEA4 188 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 FAM76AQ8TAV0 307 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 MRPS31Q92665 395 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 PBX4Q9BYU1 374 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 ASAH2Q9NR71 780 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 BCCIPQ9P287 314 aaKnown RBP eCLIP12.47□□□□□ -0.416e-7■□□□□ 9.3
SPTBN1-203ENST00000389980 IPO11Q9UI26 975 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 CHMP2BQ9UQN3 213 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 UNC80Q8N2C7 3258 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 MYOFQ9NZM1 2061 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 GOLGA8KD6RF30 607 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 OLFM2O95897 454 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 MYZAPP0CAP1 466 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 CCNB1P14635 433 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 NFKB1P19838 968 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 CCNCP24863 283 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 ACVRL1P37023 503 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 FDFT1P37268 417 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 MAGEA6P43360 314 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 ERVK-21P61565 698 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 PARP6Q2NL67 630 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 TTC19Q6DKK2 380 aaPredicted RBP12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 LEKR1Q6ZMV7 388 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 OTOP3Q7RTS5 596 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 OR52K2Q8NGK3 314 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 TSGA13Q96PP4 275 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 NKX2-4Q9H2Z4 354 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 VPS37BQ9H9H4 285 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 TMBIM4Q9HC24 238 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 UBP1Q9NZI7 540 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 DNMT3BQ9UBC3 853 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 PCDHA11Q9Y5I1 949 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 CLUHO75153 1309 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 BPTFQ12830 3046 aa12.47□□□□□ -0.41
SPTBN1-203ENST00000389980 E7ESA3 106 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 H3BNC9 293 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 SMAPO00193 183 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 PIAS1O75925 651 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 SSTR1P30872 391 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 ELK3P41970 407 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 NDST2P52849 883 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 GPX6P59796 221 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 NTHL1P78549 312 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms