RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 DACH1Q9UI36 760 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 PCDHGA8Q9Y5G5 932 aa9.96□□□□□ -0.82
IFT88-203ENST00000389373 LY6G6EA0A0G2JKS1 128 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 A0A1W2PQU0 124 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 C1QTNF3-AMACRE9PGA6 284 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 SCAMP1O15126 338 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 SPTLC2O15270 562 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 POLR2DO15514 142 aaKnown RBP9.95□□□□□ -0.82
IFT88-203ENST00000389373 SLC7A4O43246 635 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 LUC7L3O95232 432 aaKnown RBP9.95□□□□□ -0.82
IFT88-203ENST00000389373 PDIA4P13667 645 aaKnown RBP9.95□□□□□ -0.82
IFT88-203ENST00000389373 CD19P15391 556 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 ITGB6P18564 788 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 RGS7P49802 495 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 TLE1Q04724 770 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 PPP3CAQ08209 521 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 SRSF6Q13247 344 aaKnown RBP9.95□□□□□ -0.82
IFT88-203ENST00000389373 CUL4BQ13620 913 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 DRAP1Q14919 205 aaPredicted RBP9.95□□□□□ -0.82
IFT88-203ENST00000389373 TGIF1Q15583 401 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 ARHGAP17Q68EM7 881 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 OR6B2Q6IFH4 312 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 SLC9A9Q8IVB4 645 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 LGI2Q8N0V4 545 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 WDR36Q8NI36 951 aaKnown RBP9.95□□□□□ -0.82
IFT88-203ENST00000389373 SGF29Q96ES7 293 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 SPAG5Q96R06 1193 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 NUCKS1Q9H1E3 243 aaKnown RBP9.95□□□□□ -0.82
IFT88-203ENST00000389373 USP29Q9HBJ7 922 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 IPO11Q9UI26 975 aaKnown RBP9.95□□□□□ -0.82
IFT88-203ENST00000389373 TSPAN16Q9UKR8 245 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 ATXN7L1Q9ULK2 861 aaPredicted RBP9.95□□□□□ -0.82
IFT88-203ENST00000389373 U3KQA8 63 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 ITIH6Q6UXX5 1313 aa9.95□□□□□ -0.82
IFT88-203ENST00000389373 PVALEFA0A1B0GWK0 134 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 AGRPO00253 132 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 MUSKO15146 869 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 PCDH8O95206 1070 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 SFTPCP11686 197 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 KRT13P13646 458 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 PDGFRAP16234 1089 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 DAOAP59103 153 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 HNRNPKP61978 463 aaKnown RBP eCLIP9.94□□□□□ -0.82
IFT88-203ENST00000389373 BST2Q10589 180 aaKnown RBP9.94□□□□□ -0.82
IFT88-203ENST00000389373 STK4Q13043 487 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 DEFB133Q30KQ1 61 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 C4orf17Q53FE4 359 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 MS4A13Q5J8X5 152 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 AGBL4Q5VU57 503 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 RAP1GAP2Q684P5 730 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 CNNM4Q6P4Q7 775 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 XKR5Q6UX68 686 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 Q6ZSR6 202 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 PTAR1Q7Z6K3 402 aaPredicted RBP9.94□□□□□ -0.82
IFT88-203ENST00000389373 PTRH1Q86Y79 214 aaKnown RBP9.94□□□□□ -0.82
IFT88-203ENST00000389373 GRAMD1CQ8IYS0 662 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 GRAMD1AQ96CP6 724 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 IRX2Q9BZI1 471 aaPredicted RBP9.94□□□□□ -0.82
IFT88-203ENST00000389373 PREBQ9HCU5 417 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 EXOC1Q9NV70 894 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 TJP2Q9UDY2 1190 aa9.94□□□□□ -0.82
IFT88-203ENST00000389373 ARID1BQ8NFD5 2236 aaPredicted RBP9.94□□□□□ -0.82
IFT88-203ENST00000389373 CCDC187A0A096LP49 1063 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 CASC3O15234 703 aaKnown RBP9.93□□□□□ -0.82
IFT88-203ENST00000389373 CALUO43852 315 aaPredicted RBP9.93□□□□□ -0.82
IFT88-203ENST00000389373 PPFIA2O75334 1257 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 IGLV3-27P01718 113 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 PDCP20941 246 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 HNRNPA2B1P22626 353 aaKnown RBP9.93□□□□□ -0.82
IFT88-203ENST00000389373 SLC5A2P31639 672 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 INHBCP55103 352 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 NR0B2Q15466 257 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 PERM1Q5SV97 790 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 ZCCHC8Q6NZY4 707 aaKnown RBP9.93□□□□□ -0.82
IFT88-203ENST00000389373 MSANTD2Q6P1R3 559 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 C14orf80Q86SX3 495 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 CLEC14AQ86T13 490 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 CHSY1Q86X52 802 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 CIR1Q86X95 450 aaPredicted RBP9.93□□□□□ -0.82
IFT88-203ENST00000389373 FBXO39Q8N4B4 442 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 TTC39CQ8N584 583 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 TMEM145Q8NBT3 493 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 TPCN2Q8NHX9 752 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 LMX1AQ8TE12 382 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 SEMA4DQ92854 862 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 AZIN2Q96A70 460 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 IL12RB2Q99665 862 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 MIS12Q9H081 205 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 KCTD10Q9H3F6 313 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 EPB41L5Q9HCM4 733 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 CNGB3Q9NQW8 809 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 XPO7Q9UIA9 1087 aaKnown RBP9.93□□□□□ -0.82
IFT88-203ENST00000389373 SLC25A13Q9UJS0 675 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 PAXBP1Q9Y5B6 917 aa9.93□□□□□ -0.82
IFT88-203ENST00000389373 TDRD6O60522 2096 aaKnown RBP9.92□□□□□ -0.82
IFT88-203ENST00000389373 EME2A4GXA9 379 aaPredicted RBP9.92□□□□□ -0.82
IFT88-203ENST00000389373 A6NNZ2 444 aa9.92□□□□□ -0.82
IFT88-203ENST00000389373 H3BM21 787 aa9.92□□□□□ -0.82
IFT88-203ENST00000389373 KPNA3O00505 521 aaPredicted RBP9.92□□□□□ -0.82
IFT88-203ENST00000389373 PDXKO00764 312 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms