RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 OR5M3Q8NGP4 307 aa-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 RHOXF1Q8NHV9 184 aa-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TMEM174Q8WUU8 243 aa-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SNRNP27Q8WVK2 155 aaKnown RBP-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CDRT15Q96T59 188 aa-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ELF4Q99607 663 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PITX2Q99697 317 aa-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ELOVL1Q9BW60 279 aa-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SORBS1Q9BX66 1292 aaKnown RBP-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 HOXD1Q9GZZ0 328 aa-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TMX4Q9H1E5 349 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CXXC4Q9H2H0 198 aa-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 MRPL46Q9H2W6 279 aaKnown RBP-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 VCXQ9H320 206 aa-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ATAD3AQ9NVI7 634 aa-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SAE1Q9UBE0 346 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 AGO2Q9UKV8 859 aaKnown RBP-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 EXO1Q9UQ84 846 aaKnown RBP-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 COA3Q9Y2R0 106 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 B3GALT1Q9Y5Z6 326 aa-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 GBF1Q92538 1859 aa-2.07□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PRAMEF33A0A0G2JMD5 474 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 H7BY64 318 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 H7C1D1 291 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 NUPL2O15504 423 aaKnown RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 FFAR2O15552 330 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 EXOC3O60645 756 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PRAMEF10O60809 474 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CCNKO75909 580 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SEC14L2O76054 403 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PRSS23O95084 383 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 C6orf47O95873 294 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CEACAM1P13688 526 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ZNF250P15622 560 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ARSBP15848 533 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PLCG1P19174 1290 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 MC4RP32245 332 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 HALP42357 657 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 MAP2K4P45985 399 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SEPHS1P49903 392 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ALDH5A1P51649 535 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TAS2R38P59533 333 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PPIAP62937 165 aaKnown RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TAP2Q03519 686 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TGM3Q08188 693 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 RAD51AP2Q09MP3 1159 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 NCOA4Q13772 614 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 BOP1Q14137 746 aaKnown RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TRIM61Q5EBN2 209 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 DNTTIP2Q5QJE6 756 aaKnown RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PIK3CD-AS1Q5SR53 167 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ATAD3CQ5T2N8 411 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CACHD1Q5VU97 1274 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 BHLHB9Q6PI77 547 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PARM1Q6UWI2 310 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SERPINA13PQ6UXR4 307 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PDZD4Q76G19 769 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 DSG4Q86SJ6 1040 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 KIAA0825Q8IV33 1275 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PLEKHM2Q8IWE5 1019 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ZNF557Q8N988 423 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SLC24A4Q8NFF2 622 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ADCY4Q8NFM4 1077 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 LNX1Q8TBB1 728 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ZNF596Q8TC21 504 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 BCAS4Q8TDM0 211 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 C10orf105Q8TEF2 133 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SLCO4A1Q96BD0 722 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PTERQ96BW5 349 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TMEM169Q96HH4 297 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 FYTTD1Q96QD9 318 aaKnown RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 MED15Q96RN5 788 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SCNM1Q9BWG6 230 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TP63Q9H3D4 680 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ADGRL4Q9HBW9 690 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ZNF331Q9NQX6 463 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 INTS7Q9NVH2 962 aaKnown RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ZKSCAN7Q9P0L1 754 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 FBXL7Q9UJT9 491 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 BRPF3Q9ULD4 1205 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 NAALAD2Q9Y3Q0 740 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 SAMM50Q9Y512 469 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 TIMM13Q9Y5L4 95 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CLCA3PQ9Y6N3 262 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PI4KAP42356 2102 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 GTF3C1Q12789 2109 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 LMTK3Q96Q04 1460 aa-2.08□□□□□ -2.74
RNU6-1340P-201ENST00000384438 GCN1Q92616 2671 aaKnown RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 KIAA2026Q5HYC2 2103 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ARHGAP10A1A4S6 786 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 A8MV72 311 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PALM2-AKAP2B1ALY0 433 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 MDM4O15151 490 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 ULK1O75385 1050 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 LGR5O75473 907 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 NXPH3O95157 252 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 STBD1O95210 358 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 CLDN14O95500 239 aa-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 DUS4LO95620 317 aaKnown RBP-2.09□□□□□ -2.74
RNU6-1340P-201ENST00000384438 PDGFAP04085 211 aa-2.09□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms