RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 CYTH4Q9UIA0 394 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 CLCA2Q9UQC9 943 aa16.49■□□□□ 0.23
VCX3A-201ENST00000381089 NYNRINQ9P2P1 1898 aaKnown RBP16.48■□□□□ 0.23
VCX3A-201ENST00000381089 BPTFQ12830 3046 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 A0A1B0GVM2 712 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 TRIM49BA6NDI0 452 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 TCAF2A6NFQ2 919 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 ATXN7O15265 892 aaPredicted RBP16.48■□□□□ 0.23
VCX3A-201ENST00000381089 PLRG1O43660 514 aaKnown RBP16.48■□□□□ 0.23
VCX3A-201ENST00000381089 TLX3O43711 291 aaPredicted RBP16.48■□□□□ 0.23
VCX3A-201ENST00000381089 TRUB2O95900 331 aaKnown RBP16.48■□□□□ 0.23
VCX3A-201ENST00000381089 ZNF18P17022 549 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 MAT2AP31153 395 aaKnown RBP16.48■□□□□ 0.23
VCX3A-201ENST00000381089 DRD3P35462 400 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 GPD2P43304 727 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 RPL34P49207 117 aaKnown RBP16.48■□□□□ 0.23
VCX3A-201ENST00000381089 CCDC15Q0P6D6 951 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 MTA1Q13330 715 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 RRAGAQ7L523 313 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 TRIM69Q86WT6 500 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 CCAR2Q8N163 923 aaKnown RBP16.48■□□□□ 0.23
VCX3A-201ENST00000381089 STK32AQ8WU08 396 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 RNF34Q969K3 372 aa16.48■□□□□ 0.23
VCX3A-201ENST00000381089 XPO7Q9UIA9 1087 aaKnown RBP16.48■□□□□ 0.23
VCX3A-201ENST00000381089 TEX51A0A1B0GUA7 166 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 KCNU1A8MYU2 1149 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 PRAMEF26H0Y7S4 382 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 ALOX15BO15296 676 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 RNGTTO60942 597 aaKnown RBP16.47■□□□□ 0.23
VCX3A-201ENST00000381089 KRT5P13647 590 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 ACP1P24666 158 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 VASPP50552 380 aaPredicted RBP16.47■□□□□ 0.23
VCX3A-201ENST00000381089 PLK1P53350 603 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 YWHAZP63104 245 aaKnown RBP16.47■□□□□ 0.23
VCX3A-201ENST00000381089 DAB2P98082 770 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 MEA1Q16626 185 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 SYPL2Q5VXT5 272 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 RFFLQ8WZ73 363 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 ERCC4Q92889 916 aaPredicted RBP16.47■□□□□ 0.23
VCX3A-201ENST00000381089 KAT5Q92993 513 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 FAM131CQ96AQ9 280 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 KLHDC7BQ96G42 594 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 DHTKD1Q96HY7 919 aaPredicted RBP16.47■□□□□ 0.23
VCX3A-201ENST00000381089 THAP9Q9H5L6 903 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 FAM204AQ9H8W3 233 aa16.47■□□□□ 0.23
VCX3A-201ENST00000381089 FARP1Q9Y4F1 1045 aaPredicted RBP16.47■□□□□ 0.23
VCX3A-201ENST00000381089 BRINP1O60477 761 aa16.46■□□□□ 0.23
VCX3A-201ENST00000381089 RTN2O75298 545 aa16.46■□□□□ 0.23
VCX3A-201ENST00000381089 VAV1P15498 845 aa16.46■□□□□ 0.23
VCX3A-201ENST00000381089 CCR1P32246 355 aa16.46■□□□□ 0.23
VCX3A-201ENST00000381089 CDK17Q00537 523 aa16.46■□□□□ 0.23
VCX3A-201ENST00000381089 ZNF211Q13398 564 aaPredicted RBP16.46■□□□□ 0.23
VCX3A-201ENST00000381089 GPR155Q7Z3F1 870 aa16.46■□□□□ 0.23
VCX3A-201ENST00000381089 SPATS2Q86XZ4 545 aaKnown RBP16.46■□□□□ 0.23
VCX3A-201ENST00000381089 FMR1NBQ8N0W7 255 aaPredicted RBP16.46■□□□□ 0.23
VCX3A-201ENST00000381089 CCDC114Q96M63 670 aa16.46■□□□□ 0.23
VCX3A-201ENST00000381089 RPRD1AQ96P16 312 aaPredicted RBP16.46■□□□□ 0.23
VCX3A-201ENST00000381089 SLC4A5Q9BY07 1137 aa16.46■□□□□ 0.23
VCX3A-201ENST00000381089 PREBQ9HCU5 417 aa16.46■□□□□ 0.23
VCX3A-201ENST00000381089 EVA1BQ9NVM1 165 aa16.46■□□□□ 0.23
VCX3A-201ENST00000381089 ARHGAP20Q9P2F6 1191 aa16.46■□□□□ 0.23
VCX3A-201ENST00000381089 MYLKQ15746 1914 aa16.46■□□□□ 0.23
VCX3A-201ENST00000381089 HELZ2Q9BYK8 2649 aaKnown RBP16.46■□□□□ 0.22
VCX3A-201ENST00000381089 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.45■□□□□ 0.22
VCX3A-201ENST00000381089 CAPN8A6NHC0 703 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 E5RJQ4 531 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 SDC3O75056 442 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 CALCAP01258 141 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 IGLV3-25P01717 112 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 PRB1P04280 392 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 INSM1Q01101 510 aaPredicted RBP16.45■□□□□ 0.22
VCX3A-201ENST00000381089 CNTN1Q12860 1018 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 ZNF177Q13360 481 aaPredicted RBP16.45■□□□□ 0.22
VCX3A-201ENST00000381089 PROX2Q3B8N5 592 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 TBC1D25Q3MII6 688 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 KANSL1Q7Z3B3 1105 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 CIR1Q86X95 450 aaPredicted RBP16.45■□□□□ 0.22
VCX3A-201ENST00000381089 DCBLD1Q8N8Z6 715 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 EHBP1Q8NDI1 1231 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 FRS2Q8WU20 508 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 GDPD2Q9HCC8 539 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 CHMP5Q9NZZ3 219 aa16.45■□□□□ 0.22
VCX3A-201ENST00000381089 PTPRQQ9UMZ3 2332 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 BICDL2A1A5D9 508 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 MCF2LO15068 1137 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 SIGLEC6O43699 453 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 ATP9BO43861 1147 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 LETM1O95202 739 aaPredicted RBP16.44■□□□□ 0.22
VCX3A-201ENST00000381089 GNA14O95837 355 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 MT-CO3P00414 261 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 ALPPL2P10696 532 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 NUMBP49757 651 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 AGBL4Q5VU57 503 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 BROXQ5VW32 411 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 NEK5Q6P3R8 708 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 DENND1BQ6P3S1 775 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 KDM7AQ6ZMT4 941 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 TMEM110Q86TL2 294 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 ARHGEF19Q8IW93 802 aa16.44■□□□□ 0.22
VCX3A-201ENST00000381089 LMO3Q8TAP4 145 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms