RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 SPAG5Q96R06 1193 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 ELF4Q99607 663 aaPredicted RBP17.36■□□□□ 0.37
SMN2-201ENST00000380741 LHX6Q9UPM6 363 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 HS3ST4Q9Y661 456 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 ADAMTS20P59510 1910 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 A0A1W2PR77 199 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 PLK4O00444 970 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 PAGE1O75459 146 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 DAB1O75553 588 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 CLCN1P35523 988 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 OXCT1P55809 520 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 UBE2HP62256 183 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 PPP2CBP62714 309 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 PPP2CAP67775 309 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 SLC6A3Q01959 620 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 INAVAQ3KP66 663 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 CCDC157Q569K6 752 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 OTUD1Q5VV17 481 aaPredicted RBP17.35■□□□□ 0.37
SMN2-201ENST00000380741 LRSAM1Q6UWE0 723 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.35■□□□□ 0.37
SMN2-201ENST00000380741 SLC26A9Q7LBE3 791 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 GATAD2AQ86YP4 633 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 SERAC1Q96JX3 654 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 FEM1AQ9BSK4 669 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 PLCB1Q9NQ66 1216 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 FTSJ1Q9UET6 329 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 SLC25A13Q9UJS0 675 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 DNAJC12Q9UKB3 198 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 ATRXP46100 2492 aa17.35■□□□□ 0.37
SMN2-201ENST00000380741 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.34■□□□□ 0.37
SMN2-201ENST00000380741 M0QYT0 321 aa17.34■□□□□ 0.37
SMN2-201ENST00000380741 FOXN3O00409 490 aaPredicted RBP17.34■□□□□ 0.37
SMN2-201ENST00000380741 LATO43561 262 aa17.34■□□□□ 0.37
SMN2-201ENST00000380741 KRT9P35527 623 aa17.34■□□□□ 0.37
SMN2-201ENST00000380741 VASPP50552 380 aaPredicted RBP17.34■□□□□ 0.37
SMN2-201ENST00000380741 ZNF177Q13360 481 aaPredicted RBP17.34■□□□□ 0.37
SMN2-201ENST00000380741 SHBQ15464 509 aa17.34■□□□□ 0.37
SMN2-201ENST00000380741 ACCSLQ4AC99 568 aa17.34■□□□□ 0.37
SMN2-201ENST00000380741 C14orf80Q86SX3 495 aa17.34■□□□□ 0.37
SMN2-201ENST00000380741 MLKLQ8NB16 471 aa17.34■□□□□ 0.37
SMN2-201ENST00000380741 OR8D1Q8WZ84 308 aa17.34■□□□□ 0.37
SMN2-201ENST00000380741 FAM131CQ96AQ9 280 aa17.34■□□□□ 0.37
SMN2-201ENST00000380741 SYNCQ9H7C4 482 aa17.34■□□□□ 0.37
SMN2-201ENST00000380741 VPS28Q9UK41 221 aa17.34■□□□□ 0.37
SMN2-201ENST00000380741 SARDHQ9UL12 918 aa17.34■□□□□ 0.37
SMN2-201ENST00000380741 TBC1D3DA0A087WVF3 549 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 TBC1D3IA0A087WXS9 549 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 TBC1D3EA0A087X179 549 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 TBC1D3KA0A087X1G2 549 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 FAM149AA5PLN7 773 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 TBC1D3FA6NER0 549 aaPredicted RBP17.33■□□□□ 0.36
SMN2-201ENST00000380741 TBC1D3LB9A6J9 549 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 ATP9BO43861 1147 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 RTN2O75298 545 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 CLDN11O75508 207 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 TBC1D3HP0C7X1 549 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 HOXB3P14651 431 aaPredicted RBP17.33■□□□□ 0.36
SMN2-201ENST00000380741 NOS2P35228 1153 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 SNX16P57768 344 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 MTA1Q13330 715 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 DLG2Q15700 870 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 MAN2A1Q16706 1144 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 TBC1D3GQ6DHY5 549 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 SMYD5Q6GMV2 418 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 TBC1D3CQ6IPX1 549 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 Q6ZVU0 165 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 DSG4Q86SJ6 1040 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 TBC1D3Q8IZP1 549 aaPredicted RBP17.33■□□□□ 0.36
SMN2-201ENST00000380741 GALNT15Q8N3T1 639 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 ZNF397Q8NF99 534 aaPredicted RBP17.33■□□□□ 0.36
SMN2-201ENST00000380741 SAP25Q8TEE9 199 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 PPP1R9BQ96SB3 815 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 SIK2Q9H0K1 926 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 GDF3Q9NR23 364 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 PIGVQ9NUD9 493 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 TPX2Q9ULW0 747 aaKnown RBP17.33■□□□□ 0.36
SMN2-201ENST00000380741 TBC1D30Q9Y2I9 924 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 GPSM3Q9Y4H4 160 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 OR51B4Q9Y5P0 310 aa17.33■□□□□ 0.36
SMN2-201ENST00000380741 TLR4O00206 839 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 PLRG1O43660 514 aaKnown RBP17.32■□□□□ 0.36
SMN2-201ENST00000380741 ADCY5O95622 1261 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 TFE3P19532 575 aaPredicted RBP17.32■□□□□ 0.36
SMN2-201ENST00000380741 NXPH1P58417 271 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 CNTN1Q12860 1018 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 SMAD1Q15797 465 aaKnown RBP17.32■□□□□ 0.36
SMN2-201ENST00000380741 TPD52L1Q16890 204 aaPredicted RBP17.32■□□□□ 0.36
SMN2-201ENST00000380741 POM121L1PQ3SYA9 428 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 C5orf22Q49AR2 442 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 AGBL4Q5VU57 503 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 NAPEPLDQ6IQ20 393 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 DPY19L2P1Q6NXN4 242 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 DHRS13Q6UX07 377 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 ZDHHC17Q8IUH5 632 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 FAM71AQ8IYT1 594 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 SH2D3CQ8N5H7 860 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 NPY6RQ99463 290 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 TKTL2Q9H0I9 626 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 MUC3BQ9H195 1237 aa17.32■□□□□ 0.36
SMN2-201ENST00000380741 ANLNQ9NQW6 1124 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms