RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 MLLT6P55198 1093 aaPredicted RBP23.61■■□□□ 1.37
VPS16-201ENST00000380443 INSCQ1MX18 579 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 PLEKHG4Q58EX7 1191 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 MROH9Q5TGP6 573 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 NDUFAF2Q8N183 169 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 DNAAF3Q8N9W5 541 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 SEPT8Q92599 483 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 FATE1Q969F0 183 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 CRISPLD2Q9H0B8 497 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 SIK2Q9H0K1 926 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 TXLNGQ9NUQ3 528 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 CLIC5Q9NZA1 410 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 ZFATQ9P243 1243 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 PRG3Q9Y2Y8 225 aaPredicted RBP23.61■■□□□ 1.37
VPS16-201ENST00000380443 F5H423 210 aaPredicted RBP23.61■■□□□ 1.37
VPS16-201ENST00000380443 MATN3O15232 486 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 ALDH2P05091 517 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 CDH17Q12864 832 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 CTXN3Q4LDR2 81 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 AFMIDQ63HM1 303 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 CCDC117Q8IWD4 279 aaPredicted RBP23.61■■□□□ 1.37
VPS16-201ENST00000380443 ARHGAP12Q8IWW6 846 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.61■■□□□ 1.37
VPS16-201ENST00000380443 SLC39A13Q96H72 371 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 FCRL5Q96RD9 977 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 IL12RB2Q99665 862 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 MLPHQ9BV36 600 aaPredicted RBP23.61■■□□□ 1.37
VPS16-201ENST00000380443 ECT2Q9H8V3 914 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 NMUR1Q9HB89 426 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 DCDC2Q9UHG0 476 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 SFMBT1Q9UHJ3 866 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 PLXNA3P51805 1871 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 PITPNM1O00562 1244 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 OR4Q2P0C623 313 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 CCNB1P14635 433 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 EN2P19622 333 aaPredicted RBP23.6■■□□□ 1.37
VPS16-201ENST00000380443 FGFR3P22607 806 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 CDK18Q07002 472 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 BMPR2Q13873 1038 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 RASSF3Q86WH2 238 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 RTL3Q8N8U3 475 aaKnown RBP23.6■■□□□ 1.37
VPS16-201ENST00000380443 SPPL2BQ8TCT7 592 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 C2orf15Q8WU43 125 aaKnown RBP23.6■■□□□ 1.37
VPS16-201ENST00000380443 TRIM56Q9BRZ2 755 aaKnown RBP23.6■■□□□ 1.37
VPS16-201ENST00000380443 TMEM175Q9BSA9 504 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 MRPL9Q9BYD2 267 aaKnown RBP23.6■■□□□ 1.37
VPS16-201ENST00000380443 NSMCE4AQ9NXX6 385 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 SIRPGQ9P1W8 387 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 DNAJB4Q9UDY4 337 aa23.6■■□□□ 1.37
VPS16-201ENST00000380443 H7C4K7 107 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 GLRA3O75311 464 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 NCALDP61601 193 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 CRADDP78560 199 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 ANO4Q32M45 955 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 MTO1Q9Y2Z2 717 aaKnown RBP23.59■■□□□ 1.37
VPS16-201ENST00000380443 E9PAM4 449 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 SPRP35270 261 aaPredicted RBP23.59■■□□□ 1.37
VPS16-201ENST00000380443 TUBP50607 506 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 ANKRD20A4Q4UJ75 823 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 FBXW10Q5XX13 1052 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 CDHR3Q6ZTQ4 885 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 CCDC91Q7Z6B0 441 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 ANKLE1Q8NAG6 615 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 STKLD1Q8NE28 680 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 CELF6Q96J87 481 aaKnown RBP23.59■■□□□ 1.37
VPS16-201ENST00000380443 SPATA17Q96L03 361 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 C7orf26Q96N11 449 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 CASD1Q96PB1 797 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 SLC13A1Q9BZW2 595 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 KLC4Q9NSK0 619 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 PPARGC1AQ9UBK2 798 aaKnown RBP23.59■■□□□ 1.37
VPS16-201ENST00000380443 OGDHLQ9ULD0 1010 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 SOX13Q9UN79 622 aa23.59■■□□□ 1.37
VPS16-201ENST00000380443 DFFAO00273 331 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 MAFKO60675 156 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 HNRNPCL1O60812 293 aaKnown RBP23.58■■□□□ 1.37
VPS16-201ENST00000380443 ITGA2BP08514 1039 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 HADHAP40939 763 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 GEMP55040 296 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 TBX4P57082 545 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 FAM171A1Q5VUB5 890 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 ATP6V0D2Q8N8Y2 350 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 PTPRN2Q92932 1015 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 ISL2Q96A47 359 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 CEP295NLQ96MC4 621 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 TUBB6Q9BUF5 446 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 PCMTD2Q9NV79 361 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 LRFN2Q9ULH4 789 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 HS3ST4Q9Y661 456 aa23.58■■□□□ 1.37
VPS16-201ENST00000380443 YWHAQP27348 245 aa23.57■■□□□ 1.36
VPS16-201ENST00000380443 NDST2P52849 883 aa23.57■■□□□ 1.36
VPS16-201ENST00000380443 GPR17Q13304 367 aa23.57■■□□□ 1.36
VPS16-201ENST00000380443 NUDCD3Q8IVD9 361 aa23.57■■□□□ 1.36
VPS16-201ENST00000380443 FAM126BQ8IXS8 530 aa23.57■■□□□ 1.36
VPS16-201ENST00000380443 PTCD2Q8WV60 388 aaKnown RBP23.57■■□□□ 1.36
VPS16-201ENST00000380443 E2F7Q96AV8 911 aa23.57■■□□□ 1.36
VPS16-201ENST00000380443 ZNF669Q96BR6 464 aaPredicted RBP23.57■■□□□ 1.36
VPS16-201ENST00000380443 SLC39A8Q9C0K1 460 aa23.57■■□□□ 1.36
VPS16-201ENST00000380443 C12orf65Q9H3J6 166 aaKnown RBP23.57■■□□□ 1.36
VPS16-201ENST00000380443 GLOD4Q9HC38 313 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms