RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 ZNF18P17022 549 aa18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 PMS1P54277 932 aaKnown RBP18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 MCCD1P59942 119 aaPredicted RBP18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 CFHR1Q03591 330 aa18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 CNTN1Q12860 1018 aa18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 PROX2Q3B8N5 592 aa18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 ANKRD40Q6AI12 368 aa18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 RRAGAQ7L523 313 aa18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 SLC35C1Q96A29 364 aa18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 SLC39A13Q96H72 371 aa18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 ARHGAP20Q9P2F6 1191 aa18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 MGAQ8IWI9 3026 aa18.33■□□□□ 0.52
PDLIM4-202ENST00000379018 SLC31A1O15431 190 aa18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 PLRG1O43660 514 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 MYF5P13349 255 aa18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 PRLRP16471 622 aa18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 ACP1P24666 158 aa18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 FMO5P49326 533 aa18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 FKBP3Q00688 224 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 STILQ15468 1287 aa18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 SETMARQ53H47 684 aaPredicted RBP18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 DSG4Q86SJ6 1040 aa18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 CCAR2Q8N163 923 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 DCBLD1Q8N8Z6 715 aa18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 KLHDC7BQ96G42 594 aa18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 FZD3Q9NPG1 666 aa18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 UCKL1Q9NWZ5 548 aa18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 SLC25A13Q9UJS0 675 aa18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 TPX2Q9ULW0 747 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-202ENST00000379018 FAM237AA0A1B0GTK4 181 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 C10orf142B7Z368 130 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 C1QTNF3-AMACRE9PGA6 284 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 THEGLP0DJG4 465 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 PCBP4P57723 403 aaKnown RBP18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 GABREP78334 506 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 PITX1P78337 314 aaPredicted RBP18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 CENPCQ03188 943 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 NNTQ13423 1086 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 ARHGAP40Q5TG30 622 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 AGBL4Q5VU57 503 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 FAM46CQ5VWP2 391 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 Q6ZVU0 165 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 SLC25A45Q8N413 288 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 RFFLQ8WZ73 363 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 ERCC4Q92889 916 aaPredicted RBP18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 RNF34Q969K3 372 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 BTN2A3PQ96KV6 586 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 CALN1Q9BXU9 219 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 OSBPL2Q9H1P3 480 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 FAM204AQ9H8W3 233 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 GDPD2Q9HCC8 539 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 CPNE5Q9HCH3 593 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 DMTF1Q9Y222 760 aa18.31■□□□□ 0.52
PDLIM4-202ENST00000379018 PRAMEF26H0Y7S4 382 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 PYCARD-AS1I3L0S3 204 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 SART1O43290 800 aaKnown RBP18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 RNGTTO60942 597 aaKnown RBP18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 TRUB2O95900 331 aaKnown RBP18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 KRT5P13647 590 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 E2F1Q01094 437 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 SULT2A1Q06520 285 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 ZNF211Q13398 564 aaPredicted RBP18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 CCDC40Q4G0X9 1142 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 BROXQ5VW32 411 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 DENND1BQ6P3S1 775 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 PCSK4Q6UW60 755 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 IQCHQ86VS3 1027 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 TRIM69Q86WT6 500 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 ARHGEF19Q8IW93 802 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 ATP6V0D2Q8N8Y2 350 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 LSM14AQ8ND56 463 aaKnown RBP18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 ZNF248Q8NDW4 579 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 FRS2Q8WU20 508 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 CCDC34Q96HJ3 373 aa18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.3■□□□□ 0.52
PDLIM4-202ENST00000379018 SLC7A4O43246 635 aa18.29■□□□□ 0.52
PDLIM4-202ENST00000379018 USP12O75317 370 aa18.29■□□□□ 0.52
PDLIM4-202ENST00000379018 DGKAP23743 735 aa18.29■□□□□ 0.52
PDLIM4-202ENST00000379018 GGCXP38435 758 aa18.29■□□□□ 0.52
PDLIM4-202ENST00000379018 OVGP1Q12889 678 aa18.29■□□□□ 0.52
PDLIM4-202ENST00000379018 DLG2Q15700 870 aa18.29■□□□□ 0.52
PDLIM4-202ENST00000379018 RABGAP1LQ5R372 815 aa18.29■□□□□ 0.52
PDLIM4-202ENST00000379018 RPRD1AQ96P16 312 aaPredicted RBP18.29■□□□□ 0.52
PDLIM4-202ENST00000379018 KDM4CQ9H3R0 1056 aa18.29■□□□□ 0.52
PDLIM4-202ENST00000379018 RMND1Q9NWS8 449 aa18.29■□□□□ 0.52
PDLIM4-202ENST00000379018 SLC12A6Q9UHW9 1150 aa18.29■□□□□ 0.52
PDLIM4-202ENST00000379018 CFAP46Q8IYW2 2715 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 A0A1B0GVM2 712 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 A0A1W2PQ27 194 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 A0A1W2PQ64 194 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 TCAF2A6NFQ2 919 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 E5RJQ4 531 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 J3QKU1 62 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 NUDT1P36639 197 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 ACADSBP45954 432 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 IRAK1P51617 712 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 TMPRSS3P57727 454 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 SLC12A1Q13621 1099 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 ZNF542PQ5EBM4 170 aa18.28■□□□□ 0.52
PDLIM4-202ENST00000379018 ZNF658Q5TYW1 1059 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms