RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 GNA13Q14344 377 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 ZNHIT3Q15649 155 aaPredicted RBP16.59■□□□□ 0.25
RGP1-201ENST00000378078 TBC1D3GQ6DHY5 549 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 TBC1D3CQ6IPX1 549 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 TBC1D3Q8IZP1 549 aaPredicted RBP16.59■□□□□ 0.25
RGP1-201ENST00000378078 ENKURQ8TC29 256 aa16.59■□□□□ 0.25
RGP1-201ENST00000378078 ZBTB45Q96K62 511 aaPredicted RBP16.59■□□□□ 0.25
RGP1-201ENST00000378078 SUCOQ9UBS9 1254 aaKnown RBP16.59■□□□□ 0.25
RGP1-201ENST00000378078 PNPLA7Q6ZV29 1317 aa16.58■□□□□ 0.25
RGP1-201ENST00000378078 CLASP1Q7Z460 1538 aa16.58■□□□□ 0.25
RGP1-201ENST00000378078 VHLP40337 213 aa16.58■□□□□ 0.25
RGP1-201ENST00000378078 ALG11Q2TAA5 492 aa16.58■□□□□ 0.25
RGP1-201ENST00000378078 ZCWPW2Q504Y3 356 aa16.58■□□□□ 0.25
RGP1-201ENST00000378078 CCNI2Q6ZMN8 369 aaPredicted RBP16.58■□□□□ 0.25
RGP1-201ENST00000378078 PEG10Q86TG7 708 aaKnown RBP16.58■□□□□ 0.25
RGP1-201ENST00000378078 MAML3Q96JK9 1138 aa16.58■□□□□ 0.25
RGP1-201ENST00000378078 PURBQ96QR8 312 aaKnown RBP16.58■□□□□ 0.25
RGP1-201ENST00000378078 DRG1Q9Y295 367 aaKnown RBP16.58■□□□□ 0.25
RGP1-201ENST00000378078 LAMC1P11047 1609 aa16.58■□□□□ 0.25
RGP1-201ENST00000378078 BCLAF3A2AJT9 711 aaKnown RBP16.58■□□□□ 0.24
RGP1-201ENST00000378078 NRF1Q16656 503 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 KBTBD12Q3ZCT8 623 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 SGSM3Q96HU1 749 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 VPS51Q9UID3 782 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 NEDD8-MDP1E9PL57 170 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 BOLA3Q53S33 107 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 CCDC126Q96EE4 140 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 CDHR5Q9HBB8 845 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.58■□□□□ 0.24
RGP1-201ENST00000378078 HES2Q9Y543 173 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 ARHGEF40Q8TER5 1519 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 HNMTP50135 292 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 ALX1Q15699 326 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 SLC15A2Q16348 729 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 PFKFB4Q16877 469 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 SPATC1LQ9H0A9 340 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 DDX18Q9NVP1 670 aaKnown RBP16.58■□□□□ 0.24
RGP1-201ENST00000378078 UBA2Q9UBT2 640 aaPredicted RBP16.58■□□□□ 0.24
RGP1-201ENST00000378078 NPC1L1Q9UHC9 1359 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 SPAG6O75602 509 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 PDK2Q15119 407 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 ZIK1Q3SY52 487 aaPredicted RBP16.58■□□□□ 0.24
RGP1-201ENST00000378078 KCTD21Q4G0X4 260 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 TTC23Q5W5X9 447 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 PSRC1Q6PGN9 363 aaPredicted RBP16.58■□□□□ 0.24
RGP1-201ENST00000378078 CXCL17Q6UXB2 119 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 SIRPGQ9P1W8 387 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 BTRCQ9Y297 605 aa16.58■□□□□ 0.24
RGP1-201ENST00000378078 A0A1B0GTH6 734 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 DCLK1O15075 740 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 ZNF605Q86T29 641 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 SUGP1Q8IWZ8 645 aaKnown RBP16.57■□□□□ 0.24
RGP1-201ENST00000378078 MAB21L3Q8N8X9 362 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 USP42Q9H9J4 1324 aaKnown RBP16.57■□□□□ 0.24
RGP1-201ENST00000378078 C4BPBP20851 252 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 MC1RQ01726 317 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 TAF2Q6P1X5 1199 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 STK32CQ86UX6 486 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 ADCY4Q8NFM4 1077 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 TAS1R2Q8TE23 839 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 CNPPD1Q9BV87 410 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 FBXO44Q9H4M3 255 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 KCNQ5Q9NR82 932 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 KCND2Q9NZV8 630 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 ZNF232Q9UNY5 417 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 EPN2O95208 641 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 PSEN2P49810 448 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 FAM98AQ8NCA5 519 aaKnown RBP16.57■□□□□ 0.24
RGP1-201ENST00000378078 SMPDL3BQ92485 455 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 FBXO6Q9NRD1 293 aaPredicted RBP16.57■□□□□ 0.24
RGP1-201ENST00000378078 ADPRHL2Q9NX46 363 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 ACOT9Q9Y305 439 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 ZNF7P17097 686 aaPredicted RBP16.57■□□□□ 0.24
RGP1-201ENST00000378078 PKNOX1P55347 436 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 GRB14Q14449 540 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 AGBL2Q5U5Z8 902 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 ZSWIM1Q9BR11 485 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 ARMCX1Q9P291 453 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 ATP5BP06576 529 aaKnown RBP16.57■□□□□ 0.24
RGP1-201ENST00000378078 GFOD2Q3B7J2 385 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 VPS33AQ96AX1 596 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 ALG9Q9H6U8 611 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 VIPAS39Q9H9C1 493 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 A0A075B6Q4 140 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 CD3EAPO15446 510 aaKnown RBP16.57■□□□□ 0.24
RGP1-201ENST00000378078 RASGRP1O95267 797 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 RENBPP51606 427 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 ACVR2BQ13705 512 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 TTC7BQ86TV6 843 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 CFAP52Q8N1V2 620 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 MARCH7Q9H992 704 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 STK39Q9UEW8 545 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 PACSIN3Q9UKS6 424 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 NDUFAF1Q9Y375 327 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 RAD54BQ9Y620 910 aa16.57■□□□□ 0.24
RGP1-201ENST00000378078 QRICH2Q9H0J4 1663 aa16.56■□□□□ 0.24
RGP1-201ENST00000378078 PHGDHO43175 533 aaKnown RBP16.56■□□□□ 0.24
RGP1-201ENST00000378078 KRT6AP02538 564 aa16.56■□□□□ 0.24
RGP1-201ENST00000378078 KRT6BP04259 564 aa16.56■□□□□ 0.24
RGP1-201ENST00000378078 BUD31P41223 144 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms