RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 HDAC11Q96DB2 347 aa21.58■■□□□ 1.05
RNF38-205ENST00000377877 CAPS2Q9BXY5 557 aa21.58■■□□□ 1.05
RNF38-205ENST00000377877 SEPT10Q9P0V9 454 aa21.58■■□□□ 1.05
RNF38-205ENST00000377877 SH3BP1Q9Y3L3 701 aa21.58■■□□□ 1.05
RNF38-205ENST00000377877 GFRA2O00451 464 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 MX2P20592 715 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 OR1E1P30953 314 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 CFAP58Q5T655 872 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 ZSCAN18Q8TBC5 510 aaPredicted RBP21.57■■□□□ 1.04
RNF38-205ENST00000377877 PWWP2AQ96N64 755 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 TDP1Q9NUW8 608 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 ANAPC5Q9UJX4 755 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 COLQQ9Y215 455 aaPredicted RBP21.57■■□□□ 1.04
RNF38-205ENST00000377877 CLUHO75153 1309 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 HELZP42694 1942 aaKnown RBP21.57■■□□□ 1.04
RNF38-205ENST00000377877 C5orf60A6NFR6 353 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 DNALI1O14645 258 aaPredicted RBP21.57■■□□□ 1.04
RNF38-205ENST00000377877 MAFKO60675 156 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 GCATO75600 419 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 LATS1O95835 1130 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 SKOR1P84550 965 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 GRIN2CQ14957 1233 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 LRIT3Q3SXY7 679 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 RHBDF2Q6PJF5 856 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 ARID3BQ8IVW6 561 aaPredicted RBP21.57■■□□□ 1.04
RNF38-205ENST00000377877 CCHCR1Q8TD31 782 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 HMCESQ96FZ2 354 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 FAM107BQ9H098 131 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 DZANK1Q9NVP4 752 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 TPX2Q9ULW0 747 aaKnown RBP21.57■■□□□ 1.04
RNF38-205ENST00000377877 XIRP2A4UGR9 3374 aa21.57■■□□□ 1.04
RNF38-205ENST00000377877 RNF103O00237 685 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 METTL18O95568 372 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 NDST2P52849 883 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 CALCOCO2Q13137 446 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 ADAM15Q13444 863 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 DNAJC21Q5F1R6 531 aaKnown RBP21.56■■□□□ 1.04
RNF38-205ENST00000377877 RABGAP1LQ5R372 815 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 ANKRD20A2Q5SQ80 823 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 ANKRD20A1Q5TYW2 823 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 ANKRD20A3Q5VUR7 823 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 GPR149Q86SP6 731 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 FAM217AQ8IXS0 508 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 C10orf67Q8IYJ2 551 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 LSM7Q9UK45 103 aaKnown RBP21.56■■□□□ 1.04
RNF38-205ENST00000377877 MYOFQ9NZM1 2061 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 TCRBV7S3A2A0A539 114 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 RASA4BC9J798 803 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 RASA4O43374 803 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 CDH4P55283 916 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 SYCP2LQ5T4T6 812 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 FAXCQ5TGI0 409 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 ANKRD22Q5VYY1 191 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 HIBCHQ6NVY1 386 aaPredicted RBP21.56■■□□□ 1.04
RNF38-205ENST00000377877 ANKRD54Q6NXT1 300 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 CCDC13Q8IYE1 715 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 CPT1BQ92523 772 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 LRRC45Q96CN5 670 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 ZIM3Q96PE6 472 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 TSGA13Q96PP4 275 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 DDX50Q9BQ39 737 aaKnown RBP21.56■■□□□ 1.04
RNF38-205ENST00000377877 BRD8Q9H0E9 1235 aa21.56■■□□□ 1.04
RNF38-205ENST00000377877 SOBPA7XYQ1 873 aa21.55■■□□□ 1.04
RNF38-205ENST00000377877 PTPN3P26045 913 aa21.55■■□□□ 1.04
RNF38-205ENST00000377877 ACVRL1P37023 503 aa21.55■■□□□ 1.04
RNF38-205ENST00000377877 GAD2Q05329 585 aa21.55■■□□□ 1.04
RNF38-205ENST00000377877 DLX2Q07687 328 aaPredicted RBP21.55■■□□□ 1.04
RNF38-205ENST00000377877 ZBTB17Q13105 803 aa21.55■■□□□ 1.04
RNF38-205ENST00000377877 RNASEH2BQ5TBB1 312 aaKnown RBP21.55■■□□□ 1.04
RNF38-205ENST00000377877 ZNF567Q8N184 647 aa21.55■■□□□ 1.04
RNF38-205ENST00000377877 BHMTQ93088 406 aa21.55■■□□□ 1.04
RNF38-205ENST00000377877 TMA16Q96EY4 203 aaKnown RBP21.55■■□□□ 1.04
RNF38-205ENST00000377877 LRRC3BQ96PB8 259 aa21.55■■□□□ 1.04
RNF38-205ENST00000377877 CLEC1BQ9P126 229 aa21.55■■□□□ 1.04
RNF38-205ENST00000377877 PAK5Q9P286 719 aa21.55■■□□□ 1.04
RNF38-205ENST00000377877 A0A0A0MRY4 1105 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 A0A0D9SEW6 157 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 F5H423 210 aaPredicted RBP21.54■■□□□ 1.04
RNF38-205ENST00000377877 EIF3HO15372 352 aaKnown RBP eCLIP21.54■■□□□ 1.04
RNF38-205ENST00000377877 TBL1XO60907 577 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 CCNCP24863 283 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 CHKAP35790 457 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 MAPKAPK2P49137 400 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 ADGRE1Q14246 886 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 POLD3Q15054 466 aaPredicted RBP21.54■■□□□ 1.04
RNF38-205ENST00000377877 TTMPQ5BVD1 217 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 ATPAF2Q8N5M1 289 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 SPATA13Q96N96 652 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 FMO2Q99518 471 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 LINC00597Q9H2U6 94 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 ETNK1Q9HBU6 452 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 RAB6BQ9NRW1 208 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 IPO11Q9UI26 975 aaKnown RBP21.54■■□□□ 1.04
RNF38-205ENST00000377877 FARP1Q9Y4F1 1045 aaPredicted RBP21.54■■□□□ 1.04
RNF38-205ENST00000377877 SPTBN5Q9NRC6 3674 aaKnown RBP21.54■■□□□ 1.04
RNF38-205ENST00000377877 E2F8A0AVK6 867 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 J3KR12 359 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 CLDN11O75508 207 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 JCHAINP01591 159 aa21.54■■□□□ 1.04
RNF38-205ENST00000377877 GNGT1P63211 74 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms