RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 TBC1D3EA0A087X179 549 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 TBC1D3KA0A087X1G2 549 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 TBC1D3FA6NER0 549 aaPredicted RBP15.38■□□□□ 0.05
CLCN6-204ENST00000376491 TBC1D3LB9A6J9 549 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 TLR4O00206 839 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 ENC1O14682 589 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 ATP9BO43861 1147 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 RTN2O75298 545 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 ITGAVP06756 1048 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 GLI1P08151 1106 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 TBC1D3HP0C7X1 549 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 EPHA8P29322 1005 aaPredicted RBP15.38■□□□□ 0.05
CLCN6-204ENST00000376491 CCR1P32246 355 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 GGCXP38435 758 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 USP8P40818 1118 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 VASPP50552 380 aaPredicted RBP15.38■□□□□ 0.05
CLCN6-204ENST00000376491 NXPH1P58417 271 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 AUHQ13825 339 aaKnown RBP15.38■□□□□ 0.05
CLCN6-204ENST00000376491 TBC1D3GQ6DHY5 549 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 TBC1D3CQ6IPX1 549 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 C14orf80Q86SX3 495 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 TMPRSS12Q86WS5 348 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 SPATS2Q86XZ4 545 aaKnown RBP15.38■□□□□ 0.05
CLCN6-204ENST00000376491 PASD1Q8IV76 773 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 TBC1D3Q8IZP1 549 aaPredicted RBP15.38■□□□□ 0.05
CLCN6-204ENST00000376491 PDCD7Q8N8D1 485 aaKnown RBP15.38■□□□□ 0.05
CLCN6-204ENST00000376491 SHC3Q92529 594 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 CNDP2Q96KP4 475 aaKnown RBP15.38■□□□□ 0.05
CLCN6-204ENST00000376491 PPP1R13BQ96KQ4 1090 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 SPAG5Q96R06 1193 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 SCUBE2Q9NQ36 999 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 GDF3Q9NR23 364 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 ASNSD1Q9NWL6 643 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 AJAP1Q9UKB5 411 aaPredicted RBP15.38■□□□□ 0.05
CLCN6-204ENST00000376491 VANGL2Q9ULK5 521 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 PCDHGA1Q9Y5H4 931 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 OR51B4Q9Y5P0 310 aa15.38■□□□□ 0.05
CLCN6-204ENST00000376491 ITPR1Q14643 2758 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 PLRG1O43660 514 aaKnown RBP15.37■□□□□ 0.05
CLCN6-204ENST00000376491 LDOC1O95751 146 aaPredicted RBP15.37■□□□□ 0.05
CLCN6-204ENST00000376491 ERBB2P04626 1255 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 SLC2A3P11169 496 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 ABCB4P21439 1286 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 RXRGP48443 463 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 BECN1Q14457 450 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 ACAP1Q15027 740 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 DLG2Q15700 870 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 POM121L1PQ3SYA9 428 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 EFHC1Q5JVL4 640 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 RABGAP1LQ5R372 815 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 TTC39BQ5VTQ0 682 aaPredicted RBP15.37■□□□□ 0.05
CLCN6-204ENST00000376491 AGBL4Q5VU57 503 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 OTUD1Q5VV17 481 aaPredicted RBP15.37■□□□□ 0.05
CLCN6-204ENST00000376491 NAPEPLDQ6IQ20 393 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 OLFML1Q6UWY5 402 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 FAM183BPQ6ZVS7 135 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 KANSL1Q7Z3B3 1105 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 IRF2BP1Q8IU81 584 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 EID2Q8N6I1 236 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 C1orf131Q8NDD1 294 aaKnown RBP15.37■□□□□ 0.05
CLCN6-204ENST00000376491 OR8D1Q8WZ84 308 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 RNF34Q969K3 372 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 RPRD1AQ96P16 312 aaPredicted RBP15.37■□□□□ 0.05
CLCN6-204ENST00000376491 FEM1AQ9BSK4 669 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 ERVMER34-1Q9H9K5 563 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 ANLNQ9NQW6 1124 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 APEX2Q9UBZ4 518 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 PPM1HQ9ULR3 514 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 TPX2Q9ULW0 747 aaKnown RBP15.37■□□□□ 0.05
CLCN6-204ENST00000376491 PCDHGC3Q9UN70 934 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 HS3ST4Q9Y661 456 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 LOC400499M0QZD8 3231 aa15.37■□□□□ 0.05
CLCN6-204ENST00000376491 YKT6O15498 198 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 HSF2BPO75031 334 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 RFPL3O75679 317 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 FGFR1OPO95684 399 aaKnown RBP15.36■□□□□ 0.05
CLCN6-204ENST00000376491 PON1P27169 355 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 MAT2AP31153 395 aaKnown RBP15.36■□□□□ 0.05
CLCN6-204ENST00000376491 ACADVLP49748 655 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 OXCT1P55809 520 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 CNTN1Q12860 1018 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 C5orf22Q49AR2 442 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 ACCSLQ4AC99 568 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 SLC45A4Q5BKX6 768 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 SFMBT2Q5VUG0 894 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 OR6B2Q6IFH4 312 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 C11orf57Q6ZUT1 292 aaPredicted RBP15.36■□□□□ 0.05
CLCN6-204ENST00000376491 Q6ZVU0 165 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 PRPF39Q86UA1 669 aaKnown RBP15.36■□□□□ 0.05
CLCN6-204ENST00000376491 CREBRFQ8IUR6 639 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 MFSD2AQ8NA29 543 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 TSC1Q92574 1164 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 CRELD1Q96HD1 420 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 FAM81BQ96LP2 452 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 KDM4CQ9H3R0 1056 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 SIX2Q9NPC8 291 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 SLC25A13Q9UJS0 675 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 CA5BQ9Y2D0 317 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 DOCK4Q8N1I0 1966 aa15.36■□□□□ 0.05
CLCN6-204ENST00000376491 SHROOM3Q8TF72 1996 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms