RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 PORP16435 677 aaPredicted RBP13.2□□□□□ -0.3
MSH5-204ENST00000375755 ZNF23P17027 643 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 XRCC1P18887 633 aaPredicted RBP13.2□□□□□ -0.3
MSH5-204ENST00000375755 GABRB2P47870 512 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 THOP1P52888 689 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 NAA20P61599 178 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 TRIM32Q13049 653 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 KLF10Q13118 480 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 PPP6R3Q5H9R7 873 aaPredicted RBP13.2□□□□□ -0.3
MSH5-204ENST00000375755 N4BP2L1Q5TBK1 243 aaPredicted RBP13.2□□□□□ -0.3
MSH5-204ENST00000375755 RGMBQ6NW40 437 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 PACS1Q6VY07 963 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 LPCAT2Q7L5N7 544 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 TRPV1Q8NER1 839 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 RSPH1Q8WYR4 309 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 HSPH1Q92598 858 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 C18orf25Q96B23 403 aaPredicted RBP13.2□□□□□ -0.3
MSH5-204ENST00000375755 OXCT2Q9BYC2 517 aaPredicted RBP13.2□□□□□ -0.3
MSH5-204ENST00000375755 PLGRKTQ9HBL7 147 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 MAN1C1Q9NR34 630 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 RRN3Q9NYV6 651 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 ZNHIT2Q9UHR6 403 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 RNF11Q9Y3C5 154 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 COL1A2P08123 1366 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 F2P00734 622 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 KRT7P08729 469 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 CYP2C9P11712 490 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 MLH1P40692 756 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 GSTM4Q03013 218 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 MFSD10Q14728 455 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 C16orf72Q14CZ0 275 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 ANKDD1AQ495B1 522 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 ELMSAN1Q6PJG2 1045 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 DHRS4L2Q6PKH6 230 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 IFNLR1Q8IU57 520 aaPredicted RBP13.2□□□□□ -0.3
MSH5-204ENST00000375755 CROCCP3Q8IVE0 287 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 KCTD6Q8NC69 237 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 CATSPER1Q8NEC5 780 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 PPP4R1Q8TF05 950 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 KBTBD7Q8WVZ9 684 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 RTKNQ9BST9 563 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 ELOVL4Q9GZR5 314 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 NXF3Q9H4D5 531 aaKnown RBP13.2□□□□□ -0.3
MSH5-204ENST00000375755 KLK14Q9P0G3 267 aa13.2□□□□□ -0.3
MSH5-204ENST00000375755 FAM155AB1AL88 458 aaPredicted RBP13.19□□□□□ -0.3
MSH5-204ENST00000375755 XPO1O14980 1071 aaKnown RBP13.19□□□□□ -0.3
MSH5-204ENST00000375755 KLHL41O60662 606 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 TFPTP0C1Z6 253 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 MYL4P12829 197 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 NELFEP18615 380 aaKnown RBP13.19□□□□□ -0.3
MSH5-204ENST00000375755 ALDH3B2P48448 385 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 AP3M2P53677 418 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 ATXN3P54252 364 aaPredicted RBP13.19□□□□□ -0.3
MSH5-204ENST00000375755 FLOT2Q14254 428 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 PCLAFQ15004 111 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 TRIML2Q8N7C3 387 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 GIPC3Q8TF64 312 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 CALN1Q9BXU9 219 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 AIM2O14862 343 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 SERPINE1P05121 402 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 COL6A2P12110 1019 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 ALOX15P16050 662 aaPredicted RBP13.19□□□□□ -0.3
MSH5-204ENST00000375755 TAP1Q03518 808 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 ZNF667Q5HYK9 610 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 C10orf107Q8IVU9 208 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 KIF12Q96FN5 646 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 BIRC8Q96P09 236 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 LENG8Q96PV6 779 aaPredicted RBP13.19□□□□□ -0.3
MSH5-204ENST00000375755 OSBPL6Q9BZF3 934 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 GABRQQ9UN88 632 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 FAM159BA6NKW6 160 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 TNPO2O14787 897 aaKnown RBP13.19□□□□□ -0.3
MSH5-204ENST00000375755 PLIN3O60664 434 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 IGFBP6P24592 240 aaPredicted RBP13.19□□□□□ -0.3
MSH5-204ENST00000375755 NUDT2P50583 147 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 MS4A2Q01362 244 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 PFKPQ01813 784 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 POU5F1BQ06416 359 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 TMEM132DQ14C87 1099 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 CATSPER4Q7RTX7 472 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 TMEM126BQ8IUX1 230 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 CHERPQ8IWX8 916 aaKnown RBP13.19□□□□□ -0.3
MSH5-204ENST00000375755 LZTR1Q8N653 840 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 EMC1Q8N766 993 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 C12orf29Q8N999 325 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 SLC4A11Q8NBS3 891 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 TMEM35BQ8NCS4 154 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 SLC17A6Q9P2U8 582 aa13.19□□□□□ -0.3
MSH5-204ENST00000375755 TRIM43BA6NCK2 446 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 IL18RAPO95256 599 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 PSMC3P17980 439 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 EPHA3P29320 983 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 PRDX6P30041 224 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 PSMD7P51665 324 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 OXCT1P55809 520 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 NOMO1Q15155 1222 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 SURF1Q15526 300 aa13.18□□□□□ -0.3
MSH5-204ENST00000375755 HADHQ16836 314 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms