RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 A0A1W2PPC4 97 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 FAM170AA1A519 330 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 FAM149AA5PLN7 773 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 GOLGA6L3A6NEY3 463 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 E5RJQ4 531 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 FSBPO95073 299 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 LSM8O95777 96 aaKnown RBP12.57□□□□□ -0.4
LSM2-208ENST00000375661 ZBED1O96006 694 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 PABPC1P11940 636 aaKnown RBP12.57□□□□□ -0.4
LSM2-208ENST00000375661 CDC25BP30305 580 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 ADKP55263 362 aaKnown RBP12.57□□□□□ -0.4
LSM2-208ENST00000375661 C21orf59P57076 290 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 DAOAP59103 153 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 NOMO3P69849 1222 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 KLHL30Q0D2K2 578 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 CLEC16AQ2KHT3 1053 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 PTPN20Q4JDL3 420 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 ADGRF1Q5T601 910 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 MBLAC2Q68D91 279 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 KIAA0895LQ68EN5 471 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 LRRC69Q6ZNQ3 347 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 ADIPOR2Q86V24 386 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 MARCH9Q86YJ5 346 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 SCML4Q8N228 414 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 OR8K1Q8NGG5 319 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 ADAM32Q8TC27 787 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 CLEC4CQ8WTT0 213 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 CYB5D2Q8WUJ1 264 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 CPA5Q8WXQ8 436 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 TMA16Q96EY4 203 aaKnown RBP12.57□□□□□ -0.4
LSM2-208ENST00000375661 PPP1R13BQ96KQ4 1090 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 ORAI3Q9BRQ5 295 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 RSPH9Q9H1X1 276 aaPredicted RBP12.57□□□□□ -0.4
LSM2-208ENST00000375661 GRPEL1Q9HAV7 217 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 CNGB3Q9NQW8 809 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 ST7Q9NRC1 585 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 ARHGAP20Q9P2F6 1191 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 GGA2Q9UJY4 613 aa12.57□□□□□ -0.4
LSM2-208ENST00000375661 TPX2Q9ULW0 747 aaKnown RBP12.57□□□□□ -0.4
LSM2-208ENST00000375661 GCN1Q92616 2671 aaKnown RBP12.56□□□□□ -0.4
LSM2-208ENST00000375661 YJEFN3A6XGL0 299 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 AKR1B15C9JRZ8 316 aaPredicted RBP12.56□□□□□ -0.4
LSM2-208ENST00000375661 E7ENQ6 273 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 DDX3XO00571 662 aaKnown RBP eCLIP12.56□□□□□ -0.43e-11■■■□□ 18
LSM2-208ENST00000375661 KCNK3O14649 394 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 ENC1O14682 589 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 ATXN7O15265 892 aaPredicted RBP12.56□□□□□ -0.4
LSM2-208ENST00000375661 IRAK2O43187 625 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 RNASEH1O60930 286 aaKnown RBP12.56□□□□□ -0.4
LSM2-208ENST00000375661 ERBB2P04626 1255 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 SERPING1P05155 500 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 IGHV4-34P06331 123 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 PLEKP08567 350 aaPredicted RBP12.56□□□□□ -0.4
LSM2-208ENST00000375661 TNFAIP3P21580 790 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 ACADSBP45954 432 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 NAA35Q5VZE5 725 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 TRIM72Q6ZMU5 477 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 DRC7Q8IY82 874 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 SIX6OS1Q8N1H7 587 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 TC2NQ8N9U0 490 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 SLC30A5Q8TAD4 765 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 RNF139Q8WU17 664 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 ELF4Q99607 663 aaPredicted RBP12.56□□□□□ -0.4
LSM2-208ENST00000375661 NRSN2Q9GZP1 204 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 MIS12Q9H081 205 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 ABHD10Q9NUJ1 306 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 ABCB8Q9NUT2 735 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 CEP83Q9Y592 693 aa12.56□□□□□ -0.4
LSM2-208ENST00000375661 PLK4O00444 970 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 RFPL3O75679 317 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 FBXO21O94952 628 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 LDOC1O95751 146 aaPredicted RBP12.55□□□□□ -0.4
LSM2-208ENST00000375661 ASLP04424 464 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 TPM1P09493 284 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 JUPP14923 745 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 POLR2EP19388 210 aaKnown RBP12.55□□□□□ -0.4
LSM2-208ENST00000375661 EIF2S3P41091 472 aaKnown RBP12.55□□□□□ -0.4
LSM2-208ENST00000375661 GABRB2P47870 512 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 CENPCQ03188 943 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 RTP5Q14D33 572 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 C2CD6Q53TS8 623 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 CCDC157Q569K6 752 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 KCNT1Q5JUK3 1230 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 ERICH1Q86X53 443 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 CNGA4Q8IV77 575 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 CACTIN-AS1Q8N1I8 211 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 ZNF366Q8N895 744 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 KDM1BQ8NB78 822 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 PIP4K2CQ8TBX8 421 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 IRGQQ8WZA9 623 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 CNDP2Q96KP4 475 aaKnown RBP12.55□□□□□ -0.4
LSM2-208ENST00000375661 DCBLD2Q96PD2 775 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 NOX5Q96PH1 765 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 PABPC3Q9H361 631 aaKnown RBP12.55□□□□□ -0.4
LSM2-208ENST00000375661 PRORYQ9H606 182 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 ABCC13Q9NSE7 274 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 SEPT11Q9NVA2 429 aaKnown RBP12.55□□□□□ -0.4
LSM2-208ENST00000375661 TAS2R14Q9NYV8 317 aa12.55□□□□□ -0.4
LSM2-208ENST00000375661 FZD4Q9ULV1 537 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms