RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 TERB1Q8NA31 727 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 OSBPL11Q9BXB4 747 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 ST6GALNAC4Q9H4F1 302 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 CLK4Q9HAZ1 481 aaKnown RBP12.41□□□□□ -0.42
C9orf3-203ENST00000375315 KLK14Q9P0G3 267 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 SLC8A2Q9UPR5 921 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 SNX9Q9Y5X1 595 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 A0A087WXM4 84 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 LOC100653049A0A140TA62 436 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 GPR25O00155 361 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 KRT34O76011 436 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 KRT37O76014 449 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 ATF7P17544 494 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-203ENST00000375315 CCND3P30281 292 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-203ENST00000375315 KCNJ8Q15842 424 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 FSCN1Q16658 493 aaKnown RBP12.4□□□□□ -0.42
C9orf3-203ENST00000375315 CYP2A13Q16696 494 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 FNBP1LQ5T0N5 605 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 LGSNQ5TDP6 509 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 C7orf31Q8N865 590 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 BHMTQ93088 406 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 TAMM41Q96BW9 452 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 KREMEN1Q96MU8 473 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 NT5C1BQ96P26 610 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 APBA2Q99767 749 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 ACO2Q99798 780 aaKnown RBP12.4□□□□□ -0.42
C9orf3-203ENST00000375315 CXCL16Q9H2A7 254 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 PRPF19Q9UMS4 504 aaKnown RBP12.4□□□□□ -0.42
C9orf3-203ENST00000375315 ERGIC3Q9Y282 383 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 B3GNT3Q9Y2A9 372 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 TTLL3Q9Y4R7 772 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 A0A0B4J269 797 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 TRIM49D1C9J1S8 452 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 H0YJX3 145 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 TOM1L1O75674 476 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 DGKIO75912 1065 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 WEE2P0C1S8 567 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 TRPC3Q13507 836 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 TUBB3Q13509 450 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 MFSD10Q14728 455 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 MSS51Q4VC12 460 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 MARCH8Q5T0T0 291 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 FRA10AC1Q70Z53 315 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 ARCQ7LC44 396 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 PIWIL2Q8TC59 973 aaKnown RBP12.4□□□□□ -0.42
C9orf3-203ENST00000375315 TRUB1Q8WWH5 349 aaKnown RBP12.4□□□□□ -0.42
C9orf3-203ENST00000375315 SHC3Q92529 594 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 DLG3Q92796 817 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 CLIP3Q96DZ5 547 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 CTRCQ99895 268 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 EHD1Q9H4M9 534 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 FARP1Q9Y4F1 1045 aaPredicted RBP12.4□□□□□ -0.42
C9orf3-203ENST00000375315 WDR81Q562E7 1941 aa12.4□□□□□ -0.42
C9orf3-203ENST00000375315 H0YCG3 227 aa12.4□□□□□ -0.43
C9orf3-203ENST00000375315 INHBBP09529 407 aa12.4□□□□□ -0.43
C9orf3-203ENST00000375315 TMEM191BP0C7N4 346 aa12.4□□□□□ -0.43
C9orf3-203ENST00000375315 ARF4P18085 180 aaPredicted RBP12.4□□□□□ -0.43
C9orf3-203ENST00000375315 WDR44Q5JSH3 913 aa12.4□□□□□ -0.43
C9orf3-203ENST00000375315 PDPK2PQ6A1A2 396 aa12.4□□□□□ -0.43
C9orf3-203ENST00000375315 PLEKHA7Q6IQ23 1121 aa12.4□□□□□ -0.43
C9orf3-203ENST00000375315 FRMD7Q6ZUT3 714 aa12.4□□□□□ -0.43
C9orf3-203ENST00000375315 MCOLN2Q8IZK6 566 aa12.4□□□□□ -0.43
C9orf3-203ENST00000375315 ZNF420Q8TAQ5 688 aaPredicted RBP12.4□□□□□ -0.43
C9orf3-203ENST00000375315 TFB1MQ8WVM0 346 aaKnown RBP12.4□□□□□ -0.43
C9orf3-203ENST00000375315 USTQ9Y2C2 406 aa12.4□□□□□ -0.43
C9orf3-203ENST00000375315 KRBA1A5PL33 1030 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 E7ESA3 106 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 SNRPAP09012 282 aaKnown RBP12.39□□□□□ -0.43
C9orf3-203ENST00000375315 MCF2P10911 925 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 KRT10P13645 584 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 GARTP22102 1010 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 AKAP5P24588 427 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 L1CAMP32004 1257 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 TTKP33981 857 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 TAS2R40P59535 323 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 SP3Q02447 781 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 ZNF484Q5JVG2 852 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 RCOR2Q8IZ40 523 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 ATP2A3Q93084 1043 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 PKP2Q99959 881 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 TMEM79Q9BSE2 394 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 RTKNQ9BST9 563 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 TMEM8AQ9HCN3 771 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 ERVK-11Q9UQG0 969 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 DNAJC16Q9Y2G8 782 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 TIMM22Q9Y584 194 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 PLXNB2O15031 1838 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 A0A0G2JMZ2 1700 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 ITGAVP06756 1048 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 BPGMP07738 259 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
C9orf3-203ENST00000375315 NCF2P19878 526 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-203ENST00000375315 SLC26A2P50443 739 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 BMXP51813 675 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 EFNA5P52803 228 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 MYL6P60660 151 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 MBTD1Q05BQ5 628 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 CD300CQ08708 224 aa12.39□□□□□ -0.43
C9orf3-203ENST00000375315 ITGADQ13349 1161 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms