RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 FAM151AQ8WW52 585 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 TEKT5Q96M29 485 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 DHRS12A0PJE2 317 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 CHST10O43529 356 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 CBX6O95503 412 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 RPN2P04844 631 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 DOK7Q18PE1 504 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 TMEM44Q2T9K0 475 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 PCID2Q5JVF3 399 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 OTOAQ7RTW8 1153 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 DUSP9Q99956 384 aaKnown RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 DENND2DQ9H6A0 471 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 RPA3P35244 121 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 ACOT2P49753 483 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 ZC2HC1CQ53FD0 456 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 UNC93AQ86WB7 457 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 GNPTGQ9UJJ9 305 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 IPPQ9Y573 584 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 NR5A2O00482 541 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 LIASO43766 372 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 LYNP07948 512 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 NCAM1P13591 858 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 TCF4P15884 667 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 SCARF1Q14162 830 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 NDUFAF6Q330K2 333 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 RFTN2Q52LD8 501 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 ZNF549Q6P9A3 640 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 RNF217Q8TC41 542 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 RNF145Q96MT1 663 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 RPRD1AQ96P16 312 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 USP21Q9UK80 565 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 REM1O75628 298 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 LCP1P13796 627 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 LYPLAL1Q5VWZ2 237 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 ILDR1Q86SU0 546 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 TTLL6Q8N841 843 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 GPR101Q96P66 508 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 CINPQ9BW66 212 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 NOL6Q9H6R4 1146 aaKnown RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 CNTNAP4Q9C0A0 1308 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 EIF4E1BA6NMX2 242 aaKnown RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 DHFRP00374 187 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 SLC4A1P02730 911 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 CYP2A7P20853 494 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 KCNJ2P63252 427 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 GPSM2P81274 684 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 SCN1BQ07699 218 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 EZH2Q15910 746 aaKnown RBP10.36□□□□□ -0.75
PTCH1-204ENST00000375290 GOLGA7BQ2TAP0 167 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 KLHL17Q6TDP4 642 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 OLFML1Q6UWY5 402 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 ALDH16A1Q8IZ83 802 aa10.36□□□□□ -0.75
PTCH1-204ENST00000375290 ZNF7P17097 686 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SP100P23497 879 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 CYP2F1P24903 491 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 MVKQ03426 396 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 TRIM25Q14258 630 aaKnown RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SV2AQ7L0J3 742 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 AFG1LQ8WV93 481 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 DPY30Q9C005 99 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 CLN6Q9NWW5 311 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 NKRFO15226 690 aaKnown RBP eCLIP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 TPSB2P20231 275 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 POLD3Q15054 466 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 TPSAB1Q15661 275 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 MAPK11Q15759 364 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 MIIPQ5JXC2 388 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ATL1Q8WXF7 558 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 CYLDQ9NQC7 956 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SIN3BO75182 1162 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SERPINF2P08697 491 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 FKBP1AP62942 108 aaKnown RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 CDC16Q13042 620 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 USP39Q53GS9 565 aaKnown RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 HIPK1Q86Z02 1210 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 FAM172AQ8WUF8 416 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 BAP1Q92560 729 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SLC5A5Q92911 643 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 KLF6Q99612 283 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ZNF221Q9UK13 617 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 TBC1D30Q9Y2I9 924 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 PLLPQ9Y342 182 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 DAGLAQ9Y4D2 1042 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 LRIG2O94898 1065 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 C6orf222P0C671 652 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ZNF143P52747 638 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ELP6Q0PNE2 266 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 FAM98CQ17RN3 349 aaKnown RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 LRRC55Q6ZSA7 311 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 EPS8L1Q8TE68 723 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 ZNF606Q8WXB4 792 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 PABPC5Q96DU9 382 aaKnown RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 RUSC1Q9BVN2 902 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SMPD3Q9NY59 655 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 VPS51Q9UID3 782 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 FAM205CA6NFA0 338 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 PMM2O15305 246 aa10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SKAP2O75563 359 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-204ENST00000375290 SMNDC1O75940 238 aaKnown RBP eCLIP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms