RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 KCTD21Q4G0X4 260 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 PCID2Q5JVF3 399 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 RAB42Q8N4Z0 105 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 ELOVL6Q9H5J4 265 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 C6orf203Q9P0P8 240 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-203ENST00000375274 OR12D3Q9UGF7 316 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 LIMD1Q9UGP4 676 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 CDV3Q9UKY7 258 aaKnown RBP11.73□□□□□ -0.53
PTCH1-203ENST00000375274 PLLPQ9Y342 182 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 CNTNAP2Q9UHC6 1331 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 C5orf60A6NFR6 353 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 PTGES3LE9PB15 166 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 RECQL4O94761 1208 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 KRR1Q13601 381 aaKnown RBP11.73□□□□□ -0.53
PTCH1-203ENST00000375274 DNAJC14Q6Y2X3 702 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-203ENST00000375274 SLC16A10Q8TF71 515 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 CPT1BQ92523 772 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 UBXN6Q9BZV1 441 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 ROGDIQ9GZN7 287 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 CLUHO75153 1309 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 ADAMTS3O15072 1205 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 NPM3O75607 178 aaKnown RBP11.73□□□□□ -0.53
PTCH1-203ENST00000375274 PARNO95453 639 aaKnown RBP11.73□□□□□ -0.53
PTCH1-203ENST00000375274 USP4Q13107 963 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 NOMO1Q15155 1222 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 OVOS1Q6IE37 1185 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 PACS1Q6VY07 963 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 C10orf107Q8IVU9 208 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 RCN3Q96D15 328 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 SMARCD1Q96GM5 515 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 P2RX7Q99572 595 aaKnown RBP11.73□□□□□ -0.53
PTCH1-203ENST00000375274 C12orf65Q9H3J6 166 aaKnown RBP11.73□□□□□ -0.53
PTCH1-203ENST00000375274 FAM53CQ9NYF3 392 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 MORF4L1Q9UBU8 362 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 CRYL1Q9Y2S2 319 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 SH3BP1Q9Y3L3 701 aa11.73□□□□□ -0.53
PTCH1-203ENST00000375274 MAFO75444 373 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 SNRPB2P08579 225 aaKnown RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 CCNG1P51959 295 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 ILF2Q12905 390 aaKnown RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 PTP4A2Q12974 167 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 TSHZ1Q6ZSZ6 1077 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 PIGZQ86VD9 579 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 EID3Q8N140 333 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 RORBQ92753 470 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 ADGRE3Q9BY15 652 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 PRDM5Q9NQX1 630 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 SNX15Q9NRS6 342 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 CNOT3O75175 753 aaKnown RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 LRCH4O75427 683 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 TM7SF2O76062 418 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 KRT6AP02538 564 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 KRT6BP04259 564 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 CCDC166P0CW27 439 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 ETS2P15036 469 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 GOT1P17174 413 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 MZF1P28698 734 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 KRT6CP48668 564 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 MAPK10P53779 464 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 BLMHQ13867 455 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 CMC1Q7Z7K0 106 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 ZNF410Q86VK4 478 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 OR56A4Q8NGH8 313 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 DNAJB3Q8WWF6 145 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 SIX2Q9NPC8 291 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 PNPOQ9NVS9 261 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 DMAC2Q9NW81 257 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 SYBUQ9NX95 663 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 H2AFY2Q9P0M6 372 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 DAPK2Q9UIK4 370 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 PRPF19Q9UMS4 504 aaKnown RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 AP4B1Q9Y6B7 739 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 NFASCO94856 1347 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 A0A087X1B8 175 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 LINC00854A0A1B0GVQ3 168 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 TRIM38O00635 465 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 UPP2O95045 317 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 USP17L7P0C7H9 530 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 LBPP18428 481 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 NFKB1P19838 968 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 RAP1GDS1P52306 607 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 ST8SIA6P61647 398 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 FOLH1Q04609 750 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 SHROOM1Q2M3G4 852 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-203ENST00000375274 PGS1Q32NB8 556 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 EEF1DP3Q658K8 133 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 TRAF7Q6Q0C0 670 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 ADGRD1Q6QNK2 874 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 ZDHHC24Q6UX98 284 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 MON1BQ7L1V2 547 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 KIAA0319LQ8IZA0 1049 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 CASP10Q92851 521 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 SCUBE2Q9NQ36 999 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 PRKAG2Q9UGJ0 569 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 TMEM114B3SHH9 223 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 CBX4O00257 560 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 ZNF862O60290 1169 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 KATNA1O75449 491 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 MTA2O94776 668 aa11.72□□□□□ -0.53
PTCH1-203ENST00000375274 POU1F1P28069 291 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms