RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ACAA1P09110 424 aaPredicted RBP9.24□□□□□ -0.93
UBR4-201ENST00000375218 SUPT20HL2P0C7V6 817 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 ABCD3P28288 659 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 HNRNPH1P31943 449 aaKnown RBP9.24□□□□□ -0.93
UBR4-201ENST00000375218 PCGF2P35227 344 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 HSPA13P48723 471 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 SERPINB8P50452 374 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 RAB15P59190 212 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 FAM189A2Q15884 450 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 FKBP9P1Q75LS8 142 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 CHST3Q7LGC8 479 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 MCEMP1Q8IX19 187 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 ZNF366Q8N895 744 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 CSGALNACT1Q8TDX6 532 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 CHMP6Q96FZ7 201 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 TEX12Q9BXU0 123 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 FAM192AQ9GZU8 254 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 CFAP97Q9P2B7 532 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 ZNF148Q9UQR1 794 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 DICER1Q9UPY3 1922 aaKnown RBP9.24□□□□□ -0.93
UBR4-201ENST00000375218 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.24□□□□□ -0.93
UBR4-201ENST00000375218 LOC100653049A0A140TA62 436 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 TRAF5O00463 557 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 CIB2O75838 187 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 KRT34O76011 436 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 IFNAR1P17181 557 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 GALNT2Q10471 571 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 PEX6Q13608 980 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 NPNTQ6UXI9 565 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 CACNA2D4Q7Z3S7 1137 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 TAF8Q7Z7C8 310 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 TTC6Q86TZ1 520 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 LRRC6Q86X45 466 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 OR2W6PQ8NHA6 318 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 BCAS4Q8TDM0 211 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 NCSTNQ92542 709 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 PIMREGQ9BSJ6 248 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 NIP7Q9Y221 180 aaKnown RBP eCLIP9.24□□□□□ -0.93
UBR4-201ENST00000375218 RWDD3Q9Y3V2 267 aa9.24□□□□□ -0.93
UBR4-201ENST00000375218 A0A1W2PRU2 124 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 AXIN1O15169 862 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 SHOXO15266 292 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 GGT5P36269 586 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 GRIA2P42262 883 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 ARL4CP56559 192 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 RAB14P61106 215 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 OCRLQ01968 901 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 GPAT3Q53EU6 434 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 FAM69AQ5T7M9 428 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 ZNF425Q6IV72 752 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 ERO1BQ86YB8 467 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 CERS5Q8N5B7 392 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 CREB3L4Q8TEY5 395 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 LZICQ8WZA0 190 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 TANKQ92844 425 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 LRRC2Q9BYS8 371 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 TPK1Q9H3S4 243 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 LMBRD1Q9NUN5 540 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 PAG1Q9NWQ8 432 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 MEX3AA1L020 520 aaKnown RBP9.23□□□□□ -0.93
UBR4-201ENST00000375218 SPIRE1Q08AE8 756 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 CAMK2GQ13555 558 aaPredicted RBP9.23□□□□□ -0.93
UBR4-201ENST00000375218 FAM187BQ17R55 369 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 ARHGAP44Q17R89 818 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 PRR16Q569H4 304 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 FAM76BQ5HYJ3 339 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 RCSD1Q6JBY9 416 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 CATSPERGQ6ZRH7 1159 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 TMPRSS9Q7Z410 1059 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 CLRN3Q8NCR9 226 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 SCFD2Q8WU76 684 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 CPT1BQ92523 772 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 STAMQ92783 540 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 BRIP1Q9BX63 1249 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 TRIM54Q9BYV2 358 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 SERPINB13Q9UIV8 391 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 TRPV2Q9Y5S1 764 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 GOLGA8QA0A0J9YX86 632 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 PRPF6O94906 941 aaKnown RBP9.23□□□□□ -0.93
UBR4-201ENST00000375218 CTRB1P17538 263 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 IRAK1P51617 712 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 MTTPP55157 894 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 COPS2P61201 443 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 YWHAZP63104 245 aaKnown RBP9.23□□□□□ -0.93
UBR4-201ENST00000375218 PMP22Q01453 160 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 DCTN2Q13561 401 aaKnown RBP9.23□□□□□ -0.93
UBR4-201ENST00000375218 ZYXQ15942 572 aaKnown RBP9.23□□□□□ -0.93
UBR4-201ENST00000375218 LCN1P1Q5VSP4 162 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 CTRB2Q6GPI1 263 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 TMCO2Q7Z6W1 182 aaPredicted RBP9.23□□□□□ -0.93
UBR4-201ENST00000375218 SESTD1Q86VW0 696 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 ZMIZ2Q8NF64 920 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 KISS1RQ969F8 398 aaPredicted RBP9.23□□□□□ -0.93
UBR4-201ENST00000375218 SLC35C2Q9NQQ7 365 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 KCND3Q9UK17 655 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 AP3M1Q9Y2T2 418 aa9.23□□□□□ -0.93
UBR4-201ENST00000375218 PDGFAP04085 211 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 TMIGD3P0DMS9 266 aaPredicted RBP9.22□□□□□ -0.93
UBR4-201ENST00000375218 GJA1P17302 382 aa9.22□□□□□ -0.93
UBR4-201ENST00000375218 ITGB8P26012 769 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms