RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 APOEP02649 317 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 TROVE2P10155 538 aaKnown RBP eCLIP15.93■□□□□ 0.14
CCDC40-202ENST00000374876 NPR3P17342 541 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 SLC18A2Q05940 514 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 SLC39A12Q504Y0 691 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 CASP10Q92851 521 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 ERP27Q96DN0 273 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 IQCGQ9H095 443 aaKnown RBP15.93■□□□□ 0.14
CCDC40-202ENST00000374876 ZCWPW1Q9H0M4 648 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 MYLK2Q9H1R3 596 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 MANSC1Q9H8J5 431 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 LRRC4Q9HBW1 653 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 XAB2Q9HCS7 855 aaKnown RBP15.93■□□□□ 0.14
CCDC40-202ENST00000374876 RCOR3Q9P2K3 495 aaPredicted RBP15.93■□□□□ 0.14
CCDC40-202ENST00000374876 CDH22Q9UJ99 828 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 ZNF180Q9UJW8 692 aa15.93■□□□□ 0.14
CCDC40-202ENST00000374876 HACD1B0YJ81 288 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 TRIM49D1C9J1S8 452 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 CLDN5O00501 218 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 FAM155BO75949 473 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 UNC5CO95185 931 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 SEC24AO95486 1093 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 VNN2O95498 520 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 ATP6V1G2O95670 118 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 SNRPAP09012 282 aaKnown RBP15.92■□□□□ 0.14
CCDC40-202ENST00000374876 NEFHP12036 1026 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 CCNB1P14635 433 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 PTPN1P18031 435 aaKnown RBP15.92■□□□□ 0.14
CCDC40-202ENST00000374876 PRKCHP24723 683 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 NEK3P51956 506 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 MRPS5P82675 430 aaKnown RBP15.92■□□□□ 0.14
CCDC40-202ENST00000374876 SARNPP82979 210 aaKnown RBP15.92■□□□□ 0.14
CCDC40-202ENST00000374876 GPR17Q13304 367 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 ANKRD54Q6NXT1 300 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 SYCE2Q6PIF2 218 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 PSTKQ8IV42 348 aaKnown RBP15.92■□□□□ 0.14
CCDC40-202ENST00000374876 SIX6OS1Q8N1H7 587 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 KIF2BQ8N4N8 673 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 ZNF276Q8N554 614 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 C10orf82Q8WW14 230 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 HTR3CQ8WXA8 447 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 ACBD6Q9BR61 282 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 MED10Q9BTT4 135 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 NPHS2Q9NP85 383 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 TMLHEQ9NVH6 421 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 BAIAP2L1Q9UHR4 511 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 CHKBQ9Y259 395 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 USP3Q9Y6I4 520 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 SYNJ2BP-COX16A0A087WUM0 186 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 CXorf49A8MYA2 514 aaPredicted RBP15.92■□□□□ 0.14
CCDC40-202ENST00000374876 COPEO14579 308 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 C1QAP02745 245 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 NOS2P35228 1153 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 MAGEA3P43357 314 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 SEMA5AQ13591 1074 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 UNC5AQ6ZN44 842 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 ASRGL1Q7L266 308 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 ATAD1Q8NBU5 361 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 MSLNLQ96KJ4 702 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 FAM111AQ96PZ2 611 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 EBNA1BP2Q99848 306 aaKnown RBP15.92■□□□□ 0.14
CCDC40-202ENST00000374876 OXCT2Q9BYC2 517 aaPredicted RBP15.92■□□□□ 0.14
CCDC40-202ENST00000374876 PRDM16Q9HAZ2 1276 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 CYP4F11Q9HBI6 524 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 ARHGEF3Q9NR81 526 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 COX16Q9P0S2 106 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 FBXW11Q9UKB1 542 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 STAP1Q9ULZ2 295 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 SLC27A5Q9Y2P5 690 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 MFHAS1Q9Y4C4 1052 aa15.92■□□□□ 0.14
CCDC40-202ENST00000374876 UNC80Q8N2C7 3258 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 MYBPHLA2RUH7 354 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 H3BRJ5 948 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 ATP5HO75947 161 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 STK10O94804 968 aaKnown RBP15.91■□□□□ 0.14
CCDC40-202ENST00000374876 SRGAP2BP0DMP2 458 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 MDH1BQ5I0G3 518 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 TMC5Q6UXY8 1006 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 DENND5BQ6ZUT9 1274 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 SH2D5Q6ZV89 423 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 ZNF534Q76KX8 674 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 GSDMBQ8TAX9 411 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 SLC7A14Q8TBB6 771 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 MAGEC3Q8TD91 643 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 KCTD13Q8WZ19 329 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 TTC17Q96AE7 1141 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 SIGLEC10Q96LC7 697 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 OLFM3Q96PB7 478 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 FERMT1Q9BQL6 677 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 CRISPLD1Q9H336 500 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 PLAC1Q9HBJ0 212 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 NOD2Q9HC29 1040 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 ARHGEF4Q9NR80 690 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 MTCL1Q9Y4B5 1905 aaKnown RBP15.91■□□□□ 0.14
CCDC40-202ENST00000374876 C5orf42Q9H799 3197 aa15.91■□□□□ 0.14
CCDC40-202ENST00000374876 A0A0A0MRY4 1105 aa15.9■□□□□ 0.14
CCDC40-202ENST00000374876 M0QYT0 321 aa15.9■□□□□ 0.14
CCDC40-202ENST00000374876 KRT38O76015 456 aa15.9■□□□□ 0.14
CCDC40-202ENST00000374876 BEST1O76090 585 aa15.9■□□□□ 0.14
CCDC40-202ENST00000374876 DHRS4L1P0CG22 281 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms