RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 TERF1P54274 439 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 NME3Q13232 169 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PTK6Q13882 451 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TMCO3Q6UWJ1 677 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ALLCQ8N6M5 410 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FUT8Q9BYC5 575 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FOXP3Q9BZS1 431 aa11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 THAP10Q9P2Z0 257 aaPredicted RBP11.44□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ZNF449Q6P9G9 518 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 NPWQ8N729 165 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GRK7Q8WTQ7 553 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 SCG3Q8WXD2 468 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 HAUS1Q96CS2 278 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TMA16Q96EY4 203 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PKNOX2Q96KN3 472 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FEM1AQ9BSK4 669 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ARNT2Q9HBZ2 717 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 NFKBIL1Q9UBC1 381 aaPredicted RBP11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 XPO7Q9UIA9 1087 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 EPOP01588 193 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 SGSHP51688 502 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CDK16Q00536 496 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 SLC10A2Q12908 348 aaPredicted RBP11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 KRT81Q14533 505 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ANO4Q32M45 955 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 LGI2Q8N0V4 545 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 SRPK1Q96SB4 655 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 STIM2Q9P246 746 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 DKK3Q9UBP4 350 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CD48P09326 243 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FZD5Q13467 585 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 AGERQ15109 404 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ALFQ53S48 1182 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 RAP1GAP2Q684P5 730 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 HOOK3Q86VS8 718 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CHSY1Q86X52 802 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FRS2Q8WU20 508 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 NELL1Q92832 810 aa11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 DHX35Q9H5Z1 703 aaKnown RBP11.43□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TUBBP07437 444 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GJA4P35212 333 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ILF2Q12905 390 aaKnown RBP11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 KCTD11Q693B1 232 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TRMT11Q7Z4G4 463 aaKnown RBP11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PYROXD2Q8N2H3 581 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 SGSM3Q96HU1 749 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PSKH2Q96QS6 385 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TRPC7Q9HCX4 862 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 AP3B1O00203 1094 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 OPHN1O60890 802 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ZNF821O75541 412 aaPredicted RBP11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TNNT1P13805 278 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 IGFBP4P22692 258 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 KIR2DL1P43626 348 aaPredicted RBP11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 SPDYCQ5MJ68 293 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PCDH20Q8N6Y1 951 aaKnown RBP11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PEX13Q92968 403 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PNKPQ96T60 521 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PCDH9Q9HC56 1237 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CHD7Q9P2D1 2997 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GGA2Q9UJY4 613 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 RASA4BC9J798 803 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 RASA4O43374 803 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TPSB2P20231 275 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ZNF177Q13360 481 aaPredicted RBP11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CCINQ13939 588 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TPSAB1Q15661 275 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PLEKHG6Q3KR16 790 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CCDC13Q8IYE1 715 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MNS1Q8NEH6 495 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ECHDC3Q96DC8 303 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 FCRL5Q96RD9 977 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 SLC39A8Q9C0K1 460 aa11.42□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PI4K2BG5E9Z4 385 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PPFIA2O75334 1257 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TYRP14679 529 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 KCNA5P22460 613 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MAGEA3P43357 314 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 LMAN2Q12907 356 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PTPRNQ16849 979 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ATP13A4Q4VNC1 1196 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 PITRM1Q5JRX3 1037 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ASTLQ6HA08 431 aaPredicted RBP11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 GRAMD4Q6IC98 578 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MCUQ8NE86 351 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TMIEQ8NEW7 156 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ATL2Q8NHH9 583 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ADAM32Q8TC27 787 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 COG1Q8WTW3 980 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 ASB12Q8WXK4 309 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 LYSMD1Q96S90 227 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 VPS45Q9NRW7 570 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 INTS6Q9UL03 887 aaKnown RBP11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 CCDC163A0A0D9SF12 145 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 MFSD11O43934 449 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 TSHRP16473 764 aa11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 SERPINH1P50454 418 aaKnown RBP11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 RNASE9P60153 205 aaKnown RBP11.41□□□□□ -0.58
CSGALNACT2-201ENST00000374466 SEMA5AQ13591 1074 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms