RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 PABPC3Q9H361 631 aaKnown RBP14.57□□□□□ -0.08
TRAF1-201ENST00000373887 TMBIM4Q9HC24 238 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 O00370 1275 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 FCGR1AP12314 374 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 MSH3P20585 1137 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 TM4SF1P30408 202 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 SLC1A6P48664 564 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 NDUFV1P49821 464 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 FKBP1AP62942 108 aaKnown RBP14.57□□□□□ -0.08
TRAF1-201ENST00000373887 PDK2Q15119 407 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 FNDC5Q8NAU1 212 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 ADGRE3Q9BY15 652 aa14.57□□□□□ -0.08
TRAF1-201ENST00000373887 BIRC5O15392 142 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 RAMP2O60895 175 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 ATP6V1G2O95670 118 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 RHBDL3P58872 404 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 TGM3Q08188 693 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 SLC9A7Q96T83 725 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 ARMC7Q9H6L4 198 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 RAD54BQ9Y620 910 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 EFCAB10A6NFE3 127 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 AMPD1P23109 780 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 RHAGQ02094 409 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 PTSQ03393 145 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 LPIN1Q14693 890 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 PLPP4Q5VZY2 271 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 DEFB106AQ8N104 65 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 FIBCD1Q8N539 461 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 DGCR6LQ9BY27 220 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 ADGRB1O14514 1584 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 CCDC154A6NI56 674 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 IFRD1O00458 451 aaPredicted RBP14.56□□□□□ -0.08
TRAF1-201ENST00000373887 KPNA4O00629 521 aaPredicted RBP14.56□□□□□ -0.08
TRAF1-201ENST00000373887 UBOX5O94941 541 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 GPR1P46091 355 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 CDC42EP4Q9H3Q1 356 aaKnown RBP14.56□□□□□ -0.08
TRAF1-201ENST00000373887 CYP3A43Q9HB55 503 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 REREQ9P2R6 1566 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 SLC15A5A6NIM6 579 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 E7ENQ6 273 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 PABPC1P11940 636 aaKnown RBP14.56□□□□□ -0.08
TRAF1-201ENST00000373887 BOP1Q14137 746 aaKnown RBP14.56□□□□□ -0.08
TRAF1-201ENST00000373887 TTI2Q6NXR4 508 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 SVOPQ8N4V2 548 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 ENGASEQ8NFI3 743 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 AHCYL2Q96HN2 611 aaKnown RBP14.56□□□□□ -0.08
TRAF1-201ENST00000373887 RNF145Q96MT1 663 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 CNPY3Q9BT09 278 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 NDUFA13Q9P0J0 144 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 NRCAMQ92823 1304 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 PPLO60437 1756 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 HK2P52789 917 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 IL31RAQ8NI17 732 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 LENG1Q96BZ8 264 aaPredicted RBP14.56□□□□□ -0.08
TRAF1-201ENST00000373887 LYVE1Q9Y5Y7 322 aa14.56□□□□□ -0.08
TRAF1-201ENST00000373887 TAF4O00268 1085 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 CBWD3Q5JTY5 395 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 CBWD5Q5RIA9 395 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 ATAD3BQ5T9A4 648 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 KIAA1324Q6UXG2 1013 aaKnown RBP14.55□□□□□ -0.08
TRAF1-201ENST00000373887 CLYBLQ8N0X4 340 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 CNPY4Q8N129 248 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 FRMD6Q96NE9 622 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 TMEM237Q96Q45 408 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 MYLK2Q9H1R3 596 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 RBP1P09455 135 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 FGRP09769 529 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 MARK2Q7KZI7 788 aaKnown RBP14.55□□□□□ -0.08
TRAF1-201ENST00000373887 R3HCC1LQ7Z5L2 792 aaKnown RBP14.55□□□□□ -0.08
TRAF1-201ENST00000373887 NSMCE2Q96MF7 247 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 DCLRE1BQ9H816 532 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 POLR2EP19388 210 aaKnown RBP14.55□□□□□ -0.08
TRAF1-201ENST00000373887 ITGA3P26006 1051 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 AXLP30530 894 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 DLG4P78352 724 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 NDUFAF6Q330K2 333 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 MARC1Q5VT66 337 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 HLA-DQA1Q5Y7H0 255 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 LRRC49Q8IUZ0 686 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 MCRS1Q96EZ8 462 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 PDLIM2Q96JY6 352 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 TKTL2Q9H0I9 626 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 PSMD11O00231 422 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 IDH3BO43837 385 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 SEC22BO75396 215 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 MPP3Q13368 585 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 KRT74Q7RTS7 529 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 RORBQ92753 470 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 SYN2Q92777 582 aaPredicted RBP14.55□□□□□ -0.08
TRAF1-201ENST00000373887 FRMD8Q9BZ67 464 aaPredicted RBP14.55□□□□□ -0.08
TRAF1-201ENST00000373887 ACOT9Q9Y305 439 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 TNFSF9P41273 254 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 CES3Q6UWW8 571 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 KIAA0408Q6ZU52 694 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 KCNK18Q7Z418 384 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 DHFR2Q86XF0 187 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 C7orf61Q8IZ16 206 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 ZNF606Q8WXB4 792 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 RMND5BQ96G75 393 aaPredicted RBP14.55□□□□□ -0.08
TRAF1-201ENST00000373887 TBCDQ9BTW9 1192 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms