RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 FAM50BQ9Y247 325 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 ANKRD12Q6UB98 2062 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 SMIM28A0A1B0GU29 152 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 BCLAF3A2AJT9 711 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 ASB14A6NK59 587 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 GOLGA8TH3BQL2 631 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 FCHO1O14526 889 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 DYNC1LI2O43237 492 aaPredicted RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 KRT36O76013 467 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 HAUS5O94927 633 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 GSRP00390 522 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 ALDOAP04075 364 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 ENO1P06733 434 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 TPBGLP0DKB5 382 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 TROVE2P10155 538 aaKnown RBP eCLIP6.55□□□□□ -1.36
CHD6-202ENST00000373222 CCND1P24385 295 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 MGAT1P26572 445 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 PSMB4P28070 264 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 ALDH3A1P30838 453 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 MLH1P40692 756 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 SKIV2L2P42285 1042 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 NUMBP49757 651 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 CLK1P49759 484 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 RPL10AP62906 217 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 TMPRSS15P98073 1019 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 BEX3Q00994 111 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 ZBTB16Q05516 673 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 KDSRQ06136 332 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 AP1B1Q10567 949 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 USP4Q13107 963 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 COL9A2Q14055 689 aaPredicted RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 UBAP2LQ14157 1087 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 RCN2Q14257 317 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 KPNB1Q14974 876 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 BOLA3Q53S33 107 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 FAM47CQ5HY64 1035 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 GPRIN1Q7Z2K8 1008 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 ZBTB46Q86UZ6 589 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 PIGZQ86VD9 579 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 ETFBKMTQ8IXQ9 262 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 ACVR1CQ8NER5 493 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 GPRC5AQ8NFJ5 357 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 OR6J1Q8NGC5 347 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 NRG4Q8WWG1 115 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 RTP4Q96DX8 246 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 KCNK16Q96T55 309 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 APOL2Q9BQE5 337 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 KLC2Q9H0B6 622 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 TAS2R1Q9NYW7 299 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 ACTR10Q9NZ32 417 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 GMPR2Q9P2T1 348 aaKnown RBP6.55□□□□□ -1.36
CHD6-202ENST00000373222 EMCNQ9ULC0 261 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 PLLPQ9Y342 182 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 USP3Q9Y6I4 520 aa6.55□□□□□ -1.36
CHD6-202ENST00000373222 PDE4DIPQ5VU43 2346 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.54□□□□□ -1.36
CHD6-202ENST00000373222 KPNA7A9QM74 516 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 NRP1O14786 923 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 ERVK-10P10266 1014 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 GNAZP19086 355 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 PRKCHP24723 683 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 PTPN4P29074 926 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 GNL1P36915 607 aaPredicted RBP6.54□□□□□ -1.36
CHD6-202ENST00000373222 MAGEA3P43357 314 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 SMCPP49901 116 aaPredicted RBP6.54□□□□□ -1.36
CHD6-202ENST00000373222 ALDH18A1P54886 795 aaKnown RBP6.54□□□□□ -1.36
CHD6-202ENST00000373222 CDK16Q00536 496 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 ACAP1Q15027 740 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 PDK2Q15119 407 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 TAF11Q15544 211 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 DPYSL2Q16555 572 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 TEX44Q53QW1 395 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 ACSBG2Q5FVE4 666 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 FBXO47Q5MNV8 452 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 ZNF697Q5TEC3 545 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 VWA5B1Q5TIE3 1220 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 SLC27A1Q6PCB7 646 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 NXPE4Q6UWF7 544 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 PAQR9Q6ZVX9 377 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 BZW1Q7L1Q6 419 aaKnown RBP6.54□□□□□ -1.36
CHD6-202ENST00000373222 CMC1Q7Z7K0 106 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 DPP9Q86TI2 863 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 MAP7D3Q8IWC1 876 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 VPS52Q8N1B4 723 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 SLC25A41Q8N5S1 370 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 PNPLA1Q8N8W4 532 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 CCNYQ8ND76 341 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 BRI3BPQ8WY22 251 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 ARNTL2Q8WYA1 636 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 MAML3Q96JK9 1138 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 EBNA1BP2Q99848 306 aaKnown RBP6.54□□□□□ -1.36
CHD6-202ENST00000373222 PAAF1Q9BRP4 392 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 TRIM6Q9C030 488 aaPredicted RBP6.54□□□□□ -1.36
CHD6-202ENST00000373222 IQCGQ9H095 443 aaKnown RBP6.54□□□□□ -1.36
CHD6-202ENST00000373222 RNPEPL1Q9HAU8 725 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 SSU72Q9NP77 194 aaKnown RBP6.54□□□□□ -1.36
CHD6-202ENST00000373222 PIGVQ9NUD9 493 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 SYBUQ9NX95 663 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 FLRT1Q9NZU1 646 aa6.54□□□□□ -1.36
CHD6-202ENST00000373222 FETUBQ9UGM5 382 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms