RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 TRIM13O60858 407 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 GABBR2O75899 941 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 FARP2O94887 1054 aaPredicted RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 STAG3L1P0CL83 205 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 GLRBP48167 497 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 EMP3P54852 163 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 NR1H2P55055 460 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 BACE1P56817 501 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 SLC6A3Q01959 620 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 LY6KQ17RY6 165 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 CCDC153Q494R4 210 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 IL23RQ5VWK5 629 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 IER5Q5VY09 327 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 GRAMD4Q6IC98 578 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 ADCY4Q8NFM4 1077 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 PDCD6IPQ8WUM4 868 aaKnown RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 TEPSINQ96N21 525 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 SPATA13Q96N96 652 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 WRNIP1Q96S55 665 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 KCTD15Q96SI1 283 aaPredicted RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 ILKAPQ9H0C8 392 aaPredicted RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 TMPRSS4Q9NRS4 437 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 PRPF19Q9UMS4 504 aaKnown RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 GJA3Q9Y6H8 435 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 SYNJ2BP-COX16A0A087WUM0 186 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 IGKV6D-21A0A0A0MT36 114 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 RNF103O00237 685 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 MDM4O15151 490 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 POLBP06746 335 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 RPL10P27635 214 aaKnown RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 PLOD1Q02809 727 aaPredicted RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 DCTN2Q13561 401 aaKnown RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 NCBP2-AS2Q69YL0 99 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 LCLAT1Q6UWP7 414 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 C4orf22Q6V702 233 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 TTC30AQ86WT1 665 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 TP53INP2Q8IXH6 220 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 OR52K1Q8NGK4 314 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 NLRP7Q8WX94 980 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 CCT7Q99832 543 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 UNKQ9C0B0 810 aaKnown RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 CAAP1Q9H8G2 361 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 COX16Q9P0S2 106 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 MORF4L1Q9UBU8 362 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 BARX2Q9UMQ3 279 aaPredicted RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 C7orf72A4D263 438 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 TK2O00142 265 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 ACKR2O00590 384 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 XPOTO43592 962 aaKnown RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 ME2P23368 584 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 GARSP41250 739 aaKnown RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 CLCN3P51790 818 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 APOFQ13790 326 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 METTL21CQ5VZV1 264 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 C7orf31Q8N865 590 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 TSPAN14Q8NG11 270 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 ZNF669Q96BR6 464 aaPredicted RBP13.97□□□□□ -0.17
USP49-201ENST00000373006 TBCBQ99426 244 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 TEX13BQ9BXU2 312 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 PCDHAC1Q9H158 963 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 NMRAL1Q9HBL8 299 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 ADA2Q9NZK5 511 aa13.97□□□□□ -0.17
USP49-201ENST00000373006 PSMC3P17980 439 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 PROZP22891 400 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 PAX3P23760 479 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 MAP7D1Q3KQU3 841 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 ARL13AQ5H913 290 aaPredicted RBP13.96□□□□□ -0.17
USP49-201ENST00000373006 UTS2BQ765I0 119 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 RP9Q8TA86 221 aaKnown RBP13.96□□□□□ -0.17
USP49-201ENST00000373006 RIN3Q8TB24 985 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 P2RY11Q96G91 374 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 C20orf96Q9NUD7 363 aaPredicted RBP13.96□□□□□ -0.17
USP49-201ENST00000373006 RNF11Q9Y3C5 154 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 SNX9Q9Y5X1 595 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 KCNK1O00180 336 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 MATN2O00339 956 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 PIGNO95427 931 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 C2P06681 752 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 TFEBP19484 476 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 SERPINB8P50452 374 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 NAGLUP54802 743 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 MXD4Q14582 209 aaPredicted RBP13.96□□□□□ -0.17
USP49-201ENST00000373006 SEL1L3Q68CR1 1132 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 FAM131BQ86XD5 332 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.96□□□□□ -0.17
USP49-201ENST00000373006 PCDH20Q8N6Y1 951 aaKnown RBP13.96□□□□□ -0.17
USP49-201ENST00000373006 CXorf38Q8TB03 319 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 CPB2Q96IY4 423 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 NT5C1AQ9BXI3 368 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 COQ10BQ9H8M1 238 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 EPS15L1Q9UBC2 864 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 ZDHHC2Q9UIJ5 367 aa13.96□□□□□ -0.17
USP49-201ENST00000373006 CAPN15O75808 1086 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 CCDC166P0CW27 439 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 STT3AP46977 705 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 GRIA4P48058 902 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 DPYSL2Q16555 572 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 ZFP1Q6P2D0 407 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 KLHL35Q6PF15 583 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 NUP93Q8N1F7 819 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms