RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 LRRC6Q86X45 466 aa13.12□□□□□ -0.31
GPC3-201ENST00000370818 TLE6Q9H808 572 aa13.12□□□□□ -0.31
GPC3-201ENST00000370818 STARD7Q9NQZ5 370 aa13.12□□□□□ -0.31
GPC3-201ENST00000370818 TBC1D13Q9NVG8 400 aa13.12□□□□□ -0.31
GPC3-201ENST00000370818 MAD1L1Q9Y6D9 718 aa13.12□□□□□ -0.31
GPC3-201ENST00000370818 IQANK1A0A1B0GTG1 560 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 ATP6V1G1O75348 118 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 STK10O94804 968 aaKnown RBP13.11□□□□□ -0.31
GPC3-201ENST00000370818 CDK16Q00536 496 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 CCDC6Q16204 474 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 PDK4Q16654 411 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 RGS9BPQ6ZS82 235 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 BEND5Q7L4P6 421 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 SPATA2LQ8IUW3 424 aaPredicted RBP13.11□□□□□ -0.31
GPC3-201ENST00000370818 PPM1NQ8N819 430 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 MIPOL1Q8TD10 442 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 HAPLN3Q96S86 360 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 DDX50Q9BQ39 737 aaKnown RBP13.11□□□□□ -0.31
GPC3-201ENST00000370818 C12orf65Q9H3J6 166 aaKnown RBP13.11□□□□□ -0.31
GPC3-201ENST00000370818 EIF2B3Q9NR50 452 aaKnown RBP13.11□□□□□ -0.31
GPC3-201ENST00000370818 DNAJB4Q9UDY4 337 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 IKBKGQ9Y6K9 419 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 NLRC5Q86WI3 1866 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 FRMPD3Q5JV73 1810 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 ARHGEF37A1IGU5 675 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 TMEM189-UBE2V1I3L0A0 370 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 UGT1A9O60656 530 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 ZWINTO95229 277 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 MLNP12872 115 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 MAGEA10P43363 369 aaPredicted RBP13.11□□□□□ -0.31
GPC3-201ENST00000370818 INHBCP55103 352 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 PPIDQ08752 370 aaKnown RBP13.11□□□□□ -0.31
GPC3-201ENST00000370818 RFWD3Q6PCD5 774 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 LVRNQ6Q4G3 990 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 CTAGE3PQ8IX95 158 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
GPC3-201ENST00000370818 GSDMBQ8TAX9 411 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 TCP10LQ8TDR4 215 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 ALKBH8Q96BT7 664 aaKnown RBP13.11□□□□□ -0.31
GPC3-201ENST00000370818 UGT1A7Q9HAW7 530 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 UGT1A10Q9HAW8 530 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 UGT1A8Q9HAW9 530 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 PIH1D1Q9NWS0 290 aaKnown RBP13.11□□□□□ -0.31
GPC3-201ENST00000370818 IGSF9Q9P2J2 1179 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 NEU3Q9UQ49 428 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 RAD54BQ9Y620 910 aa13.11□□□□□ -0.31
GPC3-201ENST00000370818 PTPRDP23468 1912 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 OAZ2O95190 189 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 CBX6O95503 412 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 MT-ND3P03897 115 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 ADRA1DP25100 572 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 PTPN3P26045 913 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 GRIK1P39086 918 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 RASSF2P50749 326 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 IFRD2Q12894 506 aaPredicted RBP13.1□□□□□ -0.31
GPC3-201ENST00000370818 DNAJC3Q13217 504 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 GPNMBQ14956 572 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 SLC39A12Q504Y0 691 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 LRRC8BQ6P9F7 803 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 ZNF449Q6P9G9 518 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 FAM47EQ6ZV65 393 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 PDZD4Q76G19 769 aaPredicted RBP13.1□□□□□ -0.31
GPC3-201ENST00000370818 ZNF276Q8N554 614 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 DEPDC1BQ8WUY9 529 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 OXNAD1Q96HP4 312 aaPredicted RBP13.1□□□□□ -0.31
GPC3-201ENST00000370818 SLC17A7Q9P2U7 560 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 ZNF180Q9UJW8 692 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 PRG3Q9Y2Y8 225 aaPredicted RBP13.1□□□□□ -0.31
GPC3-201ENST00000370818 PCDHA11Q9Y5I1 949 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 USH1CQ9Y6N9 552 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 FAM159BA6NKW6 160 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 IRAK2O43187 625 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 CSH1P0DML2 217 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 CSH2P0DML3 217 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 OR1G1P47890 313 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 CRADDP78560 199 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 SLC18A2Q05940 514 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 GALNT2Q10471 571 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 KPNB1Q14974 876 aaKnown RBP13.1□□□□□ -0.31
GPC3-201ENST00000370818 RCN1Q15293 331 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 SCD5Q86SK9 330 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 TRIM42Q8IWZ5 723 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 ARNTL2Q8WYA1 636 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 DPF3Q92784 378 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 HMX1Q9NP08 348 aaPredicted RBP13.1□□□□□ -0.31
GPC3-201ENST00000370818 SLCO1B3Q9NPD5 702 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 MOCS1Q9NZB8 636 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 STARD13Q9Y3M8 1113 aa13.1□□□□□ -0.31
GPC3-201ENST00000370818 WDR27A2RRH5 827 aa13.09□□□□□ -0.31
GPC3-201ENST00000370818 ARVCFO00192 962 aa13.09□□□□□ -0.31
GPC3-201ENST00000370818 TM9SF1O15321 606 aa13.09□□□□□ -0.31
GPC3-201ENST00000370818 NCAM2O15394 837 aa13.09□□□□□ -0.31
GPC3-201ENST00000370818 SPATA31D3P0C874 917 aa13.09□□□□□ -0.31
GPC3-201ENST00000370818 PTPN4P29074 926 aa13.09□□□□□ -0.31
GPC3-201ENST00000370818 ZNF135P52742 658 aaPredicted RBP13.09□□□□□ -0.31
GPC3-201ENST00000370818 SLC34A1Q06495 639 aa13.09□□□□□ -0.31
GPC3-201ENST00000370818 SFSWAPQ12872 951 aaKnown RBP13.09□□□□□ -0.31
GPC3-201ENST00000370818 OLIG2Q13516 323 aa13.09□□□□□ -0.31
GPC3-201ENST00000370818 ARTNQ5T4W7 220 aa13.09□□□□□ -0.31
GPC3-201ENST00000370818 TTC39BQ5VTQ0 682 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms