RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 RASA1P20936 1047 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 ISLR2Q6UXK2 745 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 WDR49Q8IV35 697 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 ULK2Q8IYT8 1036 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 CHPFQ8IZ52 775 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 PJA1Q8NG27 643 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 SAR1AQ9NR31 198 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 MAFFQ9ULX9 164 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF232Q9UNY5 417 aa12.66□□□□□ -0.38
HCFC1-202ENST00000369984 AP3D1O14617 1153 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 SERPINF2P08697 491 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 RENBPP51606 427 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 CHN2P52757 468 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 RPL19P84098 196 aaKnown RBP12.65□□□□□ -0.38
HCFC1-202ENST00000369984 LIN54Q6MZP7 749 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 GPSM1Q86YR5 675 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 EMC1Q8N766 993 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 NEK6Q9HC98 313 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 RRN3Q9NYV6 651 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF70Q9UC06 446 aaPredicted RBP12.65□□□□□ -0.38
HCFC1-202ENST00000369984 ANAPC2Q9UJX6 822 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 ENTPD4Q9Y227 616 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 SLC12A8A0AV02 714 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 CYP11B2P19099 503 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 EIF3MQ7L2H7 374 aaKnown RBP12.65□□□□□ -0.38
HCFC1-202ENST00000369984 STK32AQ8WU08 396 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 ANKZF1Q9H8Y5 726 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 TOR4AQ9NXH8 423 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 CCDC59Q9P031 241 aaKnown RBP12.65□□□□□ -0.38
HCFC1-202ENST00000369984 UQCRBP14927 111 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 ALDH5A1P51649 535 aaPredicted RBP12.65□□□□□ -0.38
HCFC1-202ENST00000369984 TKTL1P51854 596 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 EZH2Q15910 746 aaKnown RBP12.65□□□□□ -0.38
HCFC1-202ENST00000369984 CGRRF1Q99675 332 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF112Q9UJU3 913 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 ABCC3O15438 1527 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 KPNA5O15131 536 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 ATN1P54259 1190 aaPredicted RBP12.65□□□□□ -0.38
HCFC1-202ENST00000369984 AP1S1P61966 158 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 KYAT3Q6YP21 454 aaKnown RBP12.65□□□□□ -0.38
HCFC1-202ENST00000369984 FAM210AQ96ND0 272 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 PLEKHG4BQ96PX9 1271 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 L1RE1Q9UN81 338 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 BTN3A1O00481 513 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 MED24O75448 989 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 PROSCO94903 275 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 PDHA2P29803 388 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 GSTT1P30711 240 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 RPA3P35244 121 aaPredicted RBP12.65□□□□□ -0.38
HCFC1-202ENST00000369984 NPTX2P47972 431 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 CTXN3Q4LDR2 81 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 HLA-DQA1Q5Y7H0 255 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 FAM20CQ8IXL6 584 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 ACTL9Q8TC94 416 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 DLG3Q92796 817 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 CAMTA2O94983 1202 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 TPH1P17752 444 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 SSTR1P30872 391 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 RPL21P46778 160 aaKnown RBP12.65□□□□□ -0.38
HCFC1-202ENST00000369984 HIRAP54198 1017 aaPredicted RBP12.65□□□□□ -0.38
HCFC1-202ENST00000369984 ZNF470Q6ECI4 717 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 DSG4Q86SJ6 1040 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 EURLQ9NYK6 297 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
HCFC1-202ENST00000369984 H3BQF6 201 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 CBX6O95503 412 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 OR56A5P0C7T3 313 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 CDK16Q00536 496 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 BIKQ13323 160 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 ZCCHC23Q6ZST2 131 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 CCDC115Q96NT0 180 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 ASB2Q96Q27 587 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 YME1L1Q96TA2 773 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 NUDT12Q9BQG2 462 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 MYOZ2Q9NPC6 264 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 CATSPERZQ9NTU4 200 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 COG5Q9UP83 839 aa12.65□□□□□ -0.39
HCFC1-202ENST00000369984 MICAL2O94851 1124 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 SPIRE1Q08AE8 756 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 GRB10Q13322 594 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 HHIPL2Q6UWX4 724 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 OR52L1Q8NGH7 329 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 AHCYL2Q96HN2 611 aaKnown RBP12.64□□□□□ -0.39
HCFC1-202ENST00000369984 A0A096LPK6 155 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 MRASO14807 208 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 CRATP43155 626 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 GIT2Q14161 759 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 ERICH5Q6P6B1 374 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 SNX32Q86XE0 403 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 BPIFB6Q8NFQ5 453 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 SEMA6BQ9H3T3 888 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 VPS51Q9UID3 782 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 ITGA11Q9UKX5 1188 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 CASTOR2A6NHX0 329 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 LIN7AO14910 233 aaPredicted RBP12.64□□□□□ -0.39
HCFC1-202ENST00000369984 PLOD3O60568 738 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 GP5P40197 560 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 PKNOX1P55347 436 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 ZNF844Q08AG5 666 aa12.64□□□□□ -0.39
HCFC1-202ENST00000369984 CES3Q6UWW8 571 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms