RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 IMPG1Q17R60 797 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ZRANB3Q5FWF4 1079 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TTC23LQ6PF05 361 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 POTEHQ6S545 545 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 PRPF39Q86UA1 669 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC22A9Q8IVM8 553 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 DDIASQ8IXT1 998 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 OR52K1Q8NGK4 314 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 AGR3Q8TD06 166 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 HIST1H2AHQ96KK5 128 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 FCRL2Q96LA5 508 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 PWWP2AQ96N64 755 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 HIST1H2AJQ99878 128 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SYT11Q9BT88 431 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 H2AFJQ9BTM1 129 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TTPALQ9BTX7 342 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ADAMTS10Q9H324 1103 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SSU72Q9NP77 194 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ARHGEF4Q9NR80 690 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 UBA2Q9UBT2 640 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SRRDQ9UH36 339 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TRMT6Q9UJA5 497 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ECM29Q5VYK3 1845 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 MYBPHLA2RUH7 354 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TTLL13PA6NNM8 815 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CBX4O00257 560 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 PIRO00625 290 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 PRPF4O43172 522 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 DNAJC6O75061 913 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 DNAJC8O75937 253 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 VAPBO95292 243 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CD48P09326 243 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TPH1P17752 444 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CES1P23141 567 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 RPA3P35244 121 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 PPM1AP35813 382 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TSTA3Q13630 321 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TEX44Q53QW1 395 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TMC7Q7Z402 723 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ECHDC2Q86YB7 292 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CARNMT1Q8N4J0 409 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 PCDH19Q8TAB3 1148 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CD99L2Q8TCZ2 262 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 DQX1Q8TE96 717 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 GIPC2Q8TF65 315 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 DDI1Q8WTU0 396 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SEC14L1Q92503 715 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 BTN2A3PQ96KV6 586 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 EMILIN2Q9BXX0 1053 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 MRPL1Q9BYD6 325 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 EIF2B3Q9NR50 452 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 VPS45Q9NRW7 570 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TMEM161AQ9NX61 479 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 STK39Q9UEW8 545 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 MCM8Q9UJA3 840 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 FZD10Q9ULW2 581 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TELO2Q9Y4R8 837 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SQORQ9Y6N5 450 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 GRIN2DO15399 1336 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ATXN2Q99700 1313 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 LRRC37AA6NMS7 1700 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SYCE1LA8MT33 242 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 PFDN1O60925 122 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 PAGE1O75459 146 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SRP72O76094 671 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC10A3P09131 477 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CHRM3P20309 590 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 DRD4P21917 467 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CDC25CP30307 473 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 AVPR1AP37288 418 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CASP2P42575 452 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SCNN1BP51168 640 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 COPAP53621 1224 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC5A3P53794 718 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 AQP5P55064 265 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC25A11Q02978 314 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 PSMD5Q16401 504 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 RBBP7Q16576 425 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SEL1L3Q68CR1 1132 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 OLFML1Q6UWY5 402 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 CCDC149Q6ZUS6 474 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ARCQ7LC44 396 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 PCYOX1LQ8NBM8 494 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 C2orf15Q8WU43 125 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC44A1Q8WWI5 657 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TSEN34Q9BSV6 310 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 TMEM120AQ9BXJ8 343 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 GPAMQ9HCL2 828 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SAR1AQ9NR31 198 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 MRPL17Q9NRX2 175 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 IRAK4Q9NWZ3 460 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 ZNF180Q9UJW8 692 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 FBXW11Q9UKB1 542 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 DNAJC16Q9Y2G8 782 aa5.42□□□□□ -1.54
SMNDC1-202ENST00000369603 SUPT3HB4E1H0 165 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 GSTA4O15217 222 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 BIRC5O15392 142 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 MFSD11O43934 449 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 SUPT3HO75486 399 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 ITGALP20701 1170 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms