RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 FAM45AQ8TCE6 357 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 HDAC7Q8WUI4 952 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 EXOC2Q96KP1 924 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 KLHL31Q9H511 634 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 H3BQF6 201 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 HPCAL1P37235 193 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 SNX32Q86XE0 403 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 GPSM1Q86YR5 675 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 KYQ8NBH2 561 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 PMM1Q92871 262 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 ADAM2Q99965 735 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 LRRC14BA6NHZ5 514 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 RBL1P28749 1068 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 RNASE12Q5GAN4 147 aaKnown RBP18.46■□□□□ 0.55
SNX27-202ENST00000368841 CNSTQ6PJW8 725 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 TBL1XO60907 577 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 PABPC1P11940 636 aaKnown RBP18.46■□□□□ 0.55
SNX27-202ENST00000368841 RPA3P35244 121 aaPredicted RBP18.46■□□□□ 0.55
SNX27-202ENST00000368841 RAET1GQ6H3X3 334 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 TTI2Q6NXR4 508 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 FAM126BQ8IXS8 530 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 ST13P5Q8NFI4 369 aaPredicted RBP18.46■□□□□ 0.55
SNX27-202ENST00000368841 CXorf40AQ8TE69 158 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 ZFP14Q9HCL3 533 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 GALNT8Q9NY28 637 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 SNPHO15079 494 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 KRT6AP02538 564 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 KRT6BP04259 564 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 KRT6CP48668 564 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 ZDHHC15Q96MV8 337 aa18.46■□□□□ 0.55
SNX27-202ENST00000368841 UBA2Q9UBT2 640 aaPredicted RBP18.46■□□□□ 0.55
SNX27-202ENST00000368841 ACSL4O60488 711 aa18.46■□□□□ 0.54
SNX27-202ENST00000368841 MYL12AP19105 171 aa18.46■□□□□ 0.54
SNX27-202ENST00000368841 LSM3P62310 102 aaKnown RBP18.46■□□□□ 0.54
SNX27-202ENST00000368841 ZNF671Q8TAW3 534 aa18.46■□□□□ 0.54
SNX27-202ENST00000368841 MMP13P45452 471 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 CDH17Q12864 832 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 ABRQ12979 859 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 TBX2Q13207 712 aaPredicted RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 TRIM28Q13263 835 aaKnown RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 TSNQ15631 228 aaKnown RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 FSCN1Q16658 493 aaKnown RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 ZNF606Q8WXB4 792 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 CIDEBQ9UHD4 219 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 EIF2B2P49770 351 aaKnown RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 PSEN2P49810 448 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 SPANXN3Q5MJ09 141 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 ZBTB46Q86UZ6 589 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 MRPL48Q96GC5 212 aaKnown RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 OXNAD1Q96HP4 312 aaPredicted RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 S100A13Q99584 98 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 CPNE1Q99829 537 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 FRMD8P1Q9BZ68 369 aaPredicted RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 DDX20Q9UHI6 824 aaKnown RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 TMA7Q9Y2S6 64 aaKnown RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 LRATO95237 230 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 ZNF7P17097 686 aaPredicted RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 SCNN1GP51170 649 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 CORO7P57737 925 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 HSPA14Q0VDF9 509 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 POMZP3Q6PJE2 187 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 P2RX7Q99572 595 aaKnown RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 FBXO44Q9H4M3 255 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 AHSPQ9NZD4 102 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 ENTPD4Q9Y227 616 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 ADGRA3Q8IWK6 1321 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 ACAP1Q15027 740 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 CLVS1Q8IUQ0 354 aaPredicted RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 REPS2Q8NFH8 660 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 OR52K1Q8NGK4 314 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 ITFG1Q8TB96 612 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 CDRT15Q96T59 188 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 ULBP1Q9BZM6 244 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 SPATA31A5Q5VU36 1347 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 SPATA31A7Q8IWB4 1347 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 CYP2A6P11509 494 aaPredicted RBP18.45■□□□□ 0.54
SNX27-202ENST00000368841 BIKQ13323 160 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 OR56A4Q8NGH8 313 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 GAD1Q99259 594 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 ACSS2Q9NR19 701 aa18.45■□□□□ 0.54
SNX27-202ENST00000368841 RNF208Q9H0X6 261 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 TAS2R13Q9NYV9 303 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 CLDN5O00501 218 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 MRASO14807 208 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 TM9SF1O15321 606 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 KIF1CO43896 1103 aaKnown RBP18.44■□□□□ 0.54
SNX27-202ENST00000368841 RARGP13631 454 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 GSTM5P46439 218 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 ZFPM1Q8IX07 1006 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 GMCL1P1Q8NEA9 526 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 PROX1Q92786 737 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 MRPL17Q9NRX2 175 aaKnown RBP18.44■□□□□ 0.54
SNX27-202ENST00000368841 NINJ2Q9NZG7 142 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 ZBTB14O43829 449 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 PECAM1P16284 738 aaPredicted RBP18.44■□□□□ 0.54
SNX27-202ENST00000368841 RENBPP51606 427 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 ARMC12Q5T9G4 340 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 OR6K2Q8NGY2 324 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 OMA1Q96E52 524 aa18.44■□□□□ 0.54
SNX27-202ENST00000368841 DIABLOQ9NR28 239 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms