RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 FAM131CQ96AQ9 280 aa10.74□□□□□ -0.69
TUBE1-201ENST00000368657 LURAP1Q96LR2 239 aa10.74□□□□□ -0.69
TUBE1-201ENST00000368657 CDK5RAP1Q96SZ6 601 aaKnown RBP10.74□□□□□ -0.69
TUBE1-201ENST00000368657 EFHD1Q9BUP0 239 aa10.74□□□□□ -0.69
TUBE1-201ENST00000368657 SLC29A3Q9BZD2 475 aa10.74□□□□□ -0.69
TUBE1-201ENST00000368657 OSER1Q9NX31 292 aa10.74□□□□□ -0.69
TUBE1-201ENST00000368657 SCML2Q9UQR0 700 aa10.74□□□□□ -0.69
TUBE1-201ENST00000368657 TCP11X1B4DZS4 312 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 K7ENM7 598 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 MDM4O15151 490 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 CASC3O15234 703 aaKnown RBP10.73□□□□□ -0.69
TUBE1-201ENST00000368657 LDHAP00338 332 aaKnown RBP10.73□□□□□ -0.69
TUBE1-201ENST00000368657 ASLP04424 464 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 TMEM191BP0C7N4 346 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 NME1P15531 152 aaKnown RBP10.73□□□□□ -0.69
TUBE1-201ENST00000368657 HOXD9P28356 352 aaPredicted RBP10.73□□□□□ -0.69
TUBE1-201ENST00000368657 AKT2P31751 481 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 ETV5P41161 510 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 PSMD8P48556 350 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 MC1RQ01726 317 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 ZFP36L1Q07352 338 aaKnown RBP10.73□□□□□ -0.69
TUBE1-201ENST00000368657 DEFB109BQ30KR1 87 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 C8orf34Q49A92 452 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 DYMQ7RTS9 669 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 ZC3H3Q8IXZ2 948 aaKnown RBP10.73□□□□□ -0.69
TUBE1-201ENST00000368657 MYCT1Q8N699 235 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 B3GALNT2Q8NCR0 500 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 POMGNT1Q8WZA1 660 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 TTC17Q96AE7 1141 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 TMA16Q96EY4 203 aaKnown RBP10.73□□□□□ -0.69
TUBE1-201ENST00000368657 SMARCD1Q96GM5 515 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 MYO19Q96H55 970 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 MRPL45Q9BRJ2 306 aaKnown RBP10.73□□□□□ -0.69
TUBE1-201ENST00000368657 MED10Q9BTT4 135 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 NUDT5Q9UKK9 219 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 ODF2LQ9ULJ1 636 aa10.73□□□□□ -0.69
TUBE1-201ENST00000368657 EDDM13A0A1B0GTR0 161 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 A8MXQ7 604 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 SLC31A1O15431 190 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 IL1BP01584 269 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 RALAP11233 206 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 NR1D1P20393 614 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 DRD3P35462 400 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 RECQLP46063 649 aaPredicted RBP10.72□□□□□ -0.69
TUBE1-201ENST00000368657 CCL7P80098 99 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 CDC20Q12834 499 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 ME3Q16798 604 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 CRTC2Q53ET0 693 aaPredicted RBP10.72□□□□□ -0.69
TUBE1-201ENST00000368657 NEK5Q6P3R8 708 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 Q6ZSR6 202 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 ABI3BPQ7Z7G0 1075 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 BRSK2Q8IWQ3 736 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 SLC35F3Q8IY50 421 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 ZNF557Q8N988 423 aaPredicted RBP10.72□□□□□ -0.69
TUBE1-201ENST00000368657 IGSF22Q8N9C0 903 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 LMX1AQ8TE12 382 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 BTN2A2Q8WVV5 523 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 ANKRD36BP1Q96IX9 119 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 INTS2Q9H0H0 1204 aaKnown RBP10.72□□□□□ -0.69
TUBE1-201ENST00000368657 DPEP3Q9H4B8 488 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 AKAP7Q9P0M2 348 aaPredicted RBP10.72□□□□□ -0.69
TUBE1-201ENST00000368657 KCTD3Q9Y597 815 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 HS3ST3A1Q9Y663 406 aa10.72□□□□□ -0.69
TUBE1-201ENST00000368657 K7EM74 188 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 AP1G2O75843 785 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 HNRNPA2B1P22626 353 aaKnown RBP10.71□□□□□ -0.69
TUBE1-201ENST00000368657 COPB1P53618 953 aaKnown RBP10.71□□□□□ -0.69
TUBE1-201ENST00000368657 WNT7BP56706 349 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 MRPL49Q13405 166 aaKnown RBP10.71□□□□□ -0.69
TUBE1-201ENST00000368657 ZNF174Q15697 407 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 PAQR9Q6ZVX9 377 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 TMPRSS9Q7Z410 1059 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 KCNK18Q7Z418 384 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 FAM35AQ86V20 835 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 DIS3L2Q8IYB7 885 aaKnown RBP10.71□□□□□ -0.69
TUBE1-201ENST00000368657 CACNA2D3Q8IZS8 1091 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 SLC22A18ASQ8N1D0 253 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 PPP1R13BQ96KQ4 1090 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 TAAR9Q96RI9 348 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 CGRRF1Q99675 332 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 FAM213AQ9BRX8 229 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 REPIN1Q9BWE0 567 aaKnown RBP10.71□□□□□ -0.69
TUBE1-201ENST00000368657 LRRN3Q9H3W5 708 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 CAAP1Q9H8G2 361 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 NMUR1Q9HB89 426 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 CSNK1G1Q9HCP0 422 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 LATS2Q9NRM7 1088 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 SPASTQ9UBP0 616 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 NME7Q9Y5B8 376 aa10.71□□□□□ -0.69
TUBE1-201ENST00000368657 SPTY2D1-AS1A0A0U1RR47 76 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 A0A1W2PQH9 124 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 A0A1W2PQM1 296 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 VWA3AA6NCI4 1184 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 A6NNZ2 444 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 TISP43B9A030 160 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 CTDNEP1O95476 244 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 RPLP0P05388 317 aaKnown RBP10.7□□□□□ -0.7
TUBE1-201ENST00000368657 SRPRAP08240 638 aaKnown RBP10.7□□□□□ -0.7
TUBE1-201ENST00000368657 HMBSP08397 361 aa10.7□□□□□ -0.7
TUBE1-201ENST00000368657 PRKAR1AP10644 381 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms