RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 FREM2Q5SZK8 3169 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 SYNJ2BP-COX16A0A087WUM0 186 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 TBC1D3DA0A087WVF3 549 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 TBC1D3IA0A087WXS9 549 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 TBC1D3EA0A087X179 549 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 TBC1D3KA0A087X1G2 549 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 TBC1D3FA6NER0 549 aaPredicted RBP16.48■□□□□ 0.23
CKS1B-202ENST00000368436 TBC1D3LB9A6J9 549 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 GRAP2O75791 330 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 ERBB2P04626 1255 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 TBC1D3HP0C7X1 549 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 NOS2P35228 1153 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 CLCN1P35523 988 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 NUMBP49757 651 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 IRAK1P51617 712 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 METAP1P53582 386 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 SLC6A3Q01959 620 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 CENPCQ03188 943 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 PTK2Q05397 1052 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 TBC1D3GQ6DHY5 549 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 OR6B2Q6IFH4 312 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 TBC1D3CQ6IPX1 549 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.48■□□□□ 0.23
CKS1B-202ENST00000368436 SLC26A9Q7LBE3 791 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 MARCH9Q86YJ5 346 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 GATAD2AQ86YP4 633 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 CREBRFQ8IUR6 639 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 TBC1D3Q8IZP1 549 aaPredicted RBP16.48■□□□□ 0.23
CKS1B-202ENST00000368436 C1orf131Q8NDD1 294 aaKnown RBP16.48■□□□□ 0.23
CKS1B-202ENST00000368436 SERAC1Q96JX3 654 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 NOX5Q96PH1 765 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 GDF3Q9NR23 364 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 COX16Q9P0S2 106 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 ARHGAP20Q9P2F6 1191 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 AJAP1Q9UKB5 411 aaPredicted RBP16.48■□□□□ 0.23
CKS1B-202ENST00000368436 SARDHQ9UL12 918 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 VANGL2Q9ULK5 521 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 PPM1HQ9ULR3 514 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 TBC1D30Q9Y2I9 924 aa16.48■□□□□ 0.23
CKS1B-202ENST00000368436 GOLGA4Q13439 2230 aaKnown RBP16.47■□□□□ 0.23
CKS1B-202ENST00000368436 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.47■□□□□ 0.23
CKS1B-202ENST00000368436 TRABD2BA6NFA1 517 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 TLR4O00206 839 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 FOXN3O00409 490 aaPredicted RBP16.47■□□□□ 0.23
CKS1B-202ENST00000368436 ALOX15BO15296 676 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 YKT6O15498 198 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 PAGE1O75459 146 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 DAB1O75553 588 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 SNX16P57768 344 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 NXPH1P58417 271 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 PPP2CBP62714 309 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 PPP2CAP67775 309 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 NME3Q13232 169 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 ZNF177Q13360 481 aaPredicted RBP16.47■□□□□ 0.23
CKS1B-202ENST00000368436 PTPN20Q4JDL3 420 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 SLC45A4Q5BKX6 768 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 OTUD1Q5VV17 481 aaPredicted RBP16.47■□□□□ 0.23
CKS1B-202ENST00000368436 FAM46CQ5VWP2 391 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 NAPEPLDQ6IQ20 393 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 DSG4Q86SJ6 1040 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 C14orf80Q86SX3 495 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 SLC47A2Q86VL8 602 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 MFSD2AQ8NA29 543 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 OR8D1Q8WZ84 308 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 ERVMER34-1Q9H9K5 563 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 SLC25A13Q9UJS0 675 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 DNAJC12Q9UKB3 198 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 PCDHGA1Q9Y5H4 931 aa16.47■□□□□ 0.23
CKS1B-202ENST00000368436 ACACAQ13085 2346 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 DOCK4Q8N1I0 1966 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 M0QYT0 321 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 PLK4O00444 970 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 ENC1O14682 589 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 MCF2LO15068 1137 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 PLRG1O43660 514 aaKnown RBP16.46■□□□□ 0.23
CKS1B-202ENST00000368436 RTN2O75298 545 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 CLDN11O75508 207 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 ITGAVP06756 1048 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 KRT9P35527 623 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 NUDT1P36639 197 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 RXRGP48443 463 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 DLG2Q15700 870 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 CAMK4Q16566 473 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 DPY19L2P1Q6NXN4 242 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 C19orf48Q6RUI8 117 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 DHRS13Q6UX07 377 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 PRPF39Q86UA1 669 aaKnown RBP16.46■□□□□ 0.23
CKS1B-202ENST00000368436 IQCHQ86VS3 1027 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 ZDHHC17Q8IUH5 632 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 FAM71AQ8IYT1 594 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 SH2D3CQ8N5H7 860 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 MLKLQ8NB16 471 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 NPY6RQ99463 290 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 ARHGEF38Q9NXL2 777 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 RRN3Q9NYV6 651 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 DMTF1Q9Y222 760 aa16.46■□□□□ 0.23
CKS1B-202ENST00000368436 ITPR1Q14643 2758 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 LAMA5O15230 3695 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 APC2O95996 2303 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 FAM149AA5PLN7 773 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms