RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 HGH1Q9BTY7 390 aa13.12□□□□□ -0.31
PTPRK-207ENST00000368226 MPP6Q9NZW5 540 aa13.12□□□□□ -0.31
PTPRK-207ENST00000368226 CES2O00748 559 aa13.12□□□□□ -0.31
PTPRK-207ENST00000368226 HNRNPRO43390 633 aaKnown RBP13.12□□□□□ -0.31
PTPRK-207ENST00000368226 THOP1P52888 689 aa13.12□□□□□ -0.31
PTPRK-207ENST00000368226 CSTF3Q12996 717 aaKnown RBP13.12□□□□□ -0.31
PTPRK-207ENST00000368226 ITGB3BPQ13352 177 aaPredicted RBP13.12□□□□□ -0.31
PTPRK-207ENST00000368226 NOL9Q5SY16 702 aaKnown RBP13.12□□□□□ -0.31
PTPRK-207ENST00000368226 NT5DC1Q5TFE4 455 aa13.12□□□□□ -0.31
PTPRK-207ENST00000368226 TMEM245Q9H330 911 aa13.12□□□□□ -0.31
PTPRK-207ENST00000368226 ZSCAN32Q9NX65 697 aa13.12□□□□□ -0.31
PTPRK-207ENST00000368226 PLK2Q9NYY3 685 aa13.12□□□□□ -0.31
PTPRK-207ENST00000368226 SEPT3Q9UH03 358 aa13.12□□□□□ -0.31
PTPRK-207ENST00000368226 TRHDEQ9UKU6 1024 aa13.12□□□□□ -0.31
PTPRK-207ENST00000368226 RAD54BQ9Y620 910 aa13.12□□□□□ -0.31
PTPRK-207ENST00000368226 ARHGEF28Q8N1W1 1705 aaKnown RBP13.11□□□□□ -0.31
PTPRK-207ENST00000368226 KRT6AP02538 564 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 KRT6BP04259 564 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 NFKB1P19838 968 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 PTPN3P26045 913 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 VHLP40337 213 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 KRT6CP48668 564 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 MARCKSL1P49006 195 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 NPY2RP49146 381 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 CYP20A1Q6UW02 462 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 CAMKK1Q8N5S9 505 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 MAB21L3Q8N8X9 362 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 TADA1Q96BN2 335 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 ARHGAP23Q9P227 1491 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 TM9SF1O15321 606 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 DEAF1O75398 565 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-207ENST00000368226 RANBP1P43487 201 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 SCTRP47872 440 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 TGM3Q08188 693 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 COL9A3Q14050 684 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-207ENST00000368226 OTUD3Q5T2D3 398 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-207ENST00000368226 FOXR1Q6PIV2 292 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 SERPINA13PQ6UXR4 307 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 DLK2Q6UY11 383 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 TMC3Q7Z5M5 1100 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 NT5DC4Q86YG4 428 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 KIAA2013Q8IYS2 634 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 MCOLN3Q8TDD5 553 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 KRCC1Q9NPI7 259 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-207ENST00000368226 SOHLH2Q9NX45 425 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 ADCY6O43306 1168 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 NDUFS2O75306 463 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 PFKFB4Q16877 469 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 PPP1R26Q5T8A7 1209 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-207ENST00000368226 CYP4Z1Q86W10 505 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 GATAD2AQ86YP4 633 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 BBS4Q96RK4 519 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 ASB8Q9H765 288 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 L2HGDHQ9H9P8 463 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 CCDC154A6NI56 674 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 SPATA31C2B4DYI2 1134 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 PDE5AO76074 875 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 KRT8P05787 483 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 FEN1P39748 380 aaKnown RBP13.11□□□□□ -0.31
PTPRK-207ENST00000368226 SKIV2L2P42285 1042 aaKnown RBP13.11□□□□□ -0.31
PTPRK-207ENST00000368226 NDUFV1P49821 464 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 PEX5P50542 639 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 GTF2BQ00403 316 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 FASTKQ14296 549 aaKnown RBP13.11□□□□□ -0.31
PTPRK-207ENST00000368226 DSG4Q86SJ6 1040 aa13.11□□□□□ -0.31
PTPRK-207ENST00000368226 APOC4-APOC2K7ER74 178 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 MSI1O43347 362 aaKnown RBP13.1□□□□□ -0.31
PTPRK-207ENST00000368226 APOC2P02655 101 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 HNRNPCP07910 306 aaKnown RBP eCLIP13.1□□□□□ -0.315e-7■■□□□ 13
PTPRK-207ENST00000368226 PSMD5Q16401 504 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 TBCELQ5QJ74 424 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 CD99L2Q8TCZ2 262 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 SIK3Q9Y2K2 1263 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 FAM47E-STBD1D6RA91 191 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 CABYRO75952 493 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 GUCA1AP43080 201 aaPredicted RBP13.1□□□□□ -0.31
PTPRK-207ENST00000368226 PRKAG1P54619 331 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 IRX1P78414 480 aaPredicted RBP13.1□□□□□ -0.31
PTPRK-207ENST00000368226 HSDL1Q3SXM5 330 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 KLRG1Q96E93 195 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 NMRAL1Q9HBL8 299 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 CAB39Q9Y376 341 aaPredicted RBP13.1□□□□□ -0.31
PTPRK-207ENST00000368226 ZBTB14O43829 449 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 TTC7BQ86TV6 843 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 FAM228AQ86W67 206 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 GPSM1Q86YR5 675 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 GLMNQ92990 594 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 APOPT1Q96IL0 206 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 ZCCHC2Q9C0B9 1178 aaKnown RBP13.1□□□□□ -0.31
PTPRK-207ENST00000368226 TMEM114B3SHH9 223 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 FFAR3O14843 346 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 GPR42O15529 346 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 CXCL14O95715 111 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 GTF2E2P29084 291 aaKnown RBP13.1□□□□□ -0.31
PTPRK-207ENST00000368226 SERPINB3P29508 390 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 RPL7AP62424 266 aaKnown RBP13.1□□□□□ -0.31
PTPRK-207ENST00000368226 CYB5D1Q6P9G0 228 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 CNSTQ6PJW8 725 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 LZTR1Q8N653 840 aa13.1□□□□□ -0.31
PTPRK-207ENST00000368226 VCPIP1Q96JH7 1222 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms