RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 B4GALT3O60512 393 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 BANF1O75531 89 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 RFPL1O75677 317 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 ZNF189O75820 626 aaPredicted RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 PDGFBP01127 241 aaPredicted RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 APOEP02649 317 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 PABPC4LP0CB38 370 aaKnown RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 CCDC130P13994 396 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 ALOX15P16050 662 aaPredicted RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 AMPD1P23109 780 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 ACAT1P24752 427 aaKnown RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 BRD2P25440 801 aaKnown RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 IL1R2P27930 398 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 RFC1P35251 1148 aaPredicted RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 MTHFRP42898 656 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 YWHAGP61981 247 aaKnown RBP eCLIP11.81□□□□□ -0.52
USF1-201ENST00000368019 YWHAZP63104 245 aaKnown RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 BASP1P80723 227 aaKnown RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 TMPRSS15P98073 1019 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 CDC16Q13042 620 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 ITGA9Q13797 1035 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 GRM2Q14416 872 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 DUOXA2Q1HG44 320 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 NOMO2Q5JPE7 1267 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 RNF220Q5VTB9 566 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 TWF2Q6IBS0 349 aaKnown RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 TREML1Q86YW5 311 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 WDR75Q8IWA0 830 aaKnown RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 KBTBD2Q8IY47 623 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 EXOC8Q8IYI6 725 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 UBALD2Q8IYN6 164 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 ALDH16A1Q8IZ83 802 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 TTC39CQ8N584 583 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 ARFGAP1Q8N6T3 406 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 FAM172AQ8WUF8 416 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 PANX3Q96QZ0 392 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 VN1R3Q9BXE9 311 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 BCO2Q9BYV7 579 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 INO80BQ9C086 356 aaPredicted RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 KLC2Q9H0B6 622 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 PRDM16Q9HAZ2 1276 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 POPDC2Q9HBU9 364 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 S100A14Q9HCY8 104 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 DNAJC28Q9NX36 388 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 PPARGC1AQ9UBK2 798 aaKnown RBP11.81□□□□□ -0.52
USF1-201ENST00000368019 SLC7A8Q9UHI5 535 aa11.81□□□□□ -0.52
USF1-201ENST00000368019 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.81□□□□□ -0.52
USF1-201ENST00000368019 DOCK8Q8NF50 2099 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 TDRD15B5MCY1 1934 aaKnown RBP11.8□□□□□ -0.52
USF1-201ENST00000368019 FAM237BA0A1B0GVD1 139 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 TCRBV7S3A2A0A539 114 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 H3BRJ5 948 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 GOLGA8RI6L899 631 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 DPYSL4O14531 572 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 OGTO15294 1046 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 ATP9BO43861 1147 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 GLRA3O75311 464 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 TOM1L1O75674 476 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 PENKP01210 267 aaPredicted RBP11.8□□□□□ -0.52
USF1-201ENST00000368019 EPCAMP16422 314 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 L1CAMP32004 1257 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 SLC11A1P49279 550 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 NUBP1P53384 320 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 GAD2Q05329 585 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 STX3Q13277 289 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 BIRC2Q13490 618 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 INSCQ1MX18 579 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 LIN52Q52LA3 116 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 EFHC1Q5JVL4 640 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 FOXB2Q5VYV0 432 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 KIAA1841Q6NSI8 718 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 PGM2L1Q6PCE3 622 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 GLB1LQ6UWU2 654 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 IZUMO2Q6UXV1 221 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 AGMOQ6ZNB7 445 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 MARK2Q7KZI7 788 aaKnown RBP11.8□□□□□ -0.52
USF1-201ENST00000368019 MRPL10Q7Z7H8 261 aaKnown RBP11.8□□□□□ -0.52
USF1-201ENST00000368019 DHDDSQ86SQ9 333 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 TTC7BQ86TV6 843 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 XYLT1Q86Y38 959 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 PDSS2Q86YH6 399 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 CCNJLQ8IV13 435 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 NUDCD3Q8IVD9 361 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 ARID3BQ8IVW6 561 aaPredicted RBP11.8□□□□□ -0.52
USF1-201ENST00000368019 MAP7D3Q8IWC1 876 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 CCDC33Q8N5R6 958 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 C12orf76Q8N812 135 aaPredicted RBP11.8□□□□□ -0.52
USF1-201ENST00000368019 KCTD6Q8NC69 237 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 GSDMBQ8TAX9 411 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 SPATA18Q8TC71 538 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 AUTS2Q8WXX7 1259 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 FAF2Q96CS3 445 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 MRRFQ96E11 262 aaKnown RBP11.8□□□□□ -0.52
USF1-201ENST00000368019 PRR11Q96HE9 360 aaPredicted RBP11.8□□□□□ -0.52
USF1-201ENST00000368019 TBCBQ99426 244 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 TARS2Q9BW92 718 aaKnown RBP11.8□□□□□ -0.52
USF1-201ENST00000368019 MRPL4Q9BYD3 311 aaKnown RBP11.8□□□□□ -0.52
USF1-201ENST00000368019 VRTNQ9H8Y1 702 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 CYP3A43Q9HB55 503 aa11.8□□□□□ -0.52
USF1-201ENST00000368019 DZANK1Q9NVP4 752 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms