RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OSBP2Q969R2 916 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 FRMD6Q96NE9 622 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PHB2Q99623 299 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 FBXO2Q9UK22 296 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CDYLQ9Y232 598 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 AQP12BA6NM10 295 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ALOX15BO15296 676 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 GLRA3O75311 464 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 RBM34P42696 430 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ANKS1BQ7Z6G8 1248 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 AQP12AQ8IXF9 295 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ZCCHC7Q8N3Z6 543 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ZCCHC9Q8N567 271 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 COX4I2Q96KJ9 171 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 MMP27Q9H306 513 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PACSIN3Q9UKS6 424 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TDRKHQ9Y2W6 561 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PCDHB4Q9Y5E5 795 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 NDUFA8P51970 172 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ALFQ53S48 1182 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CCNYL2Q5T2Q4 361 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PSD4Q8NDX1 1056 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TTC9Q92623 222 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 NUSAP1Q9BXS6 441 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 STON1Q9Y6Q2 735 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 A0A1B0GVM2 712 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 EML1O00423 815 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CALCAP01258 141 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ACPPP15309 386 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 STAT3P40763 770 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 RPS7P62081 194 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 UXS1Q8NBZ7 420 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 DCAKDQ8WVC6 231 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SLC25A36Q96CQ1 311 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PCDHGB3Q9Y5G1 929 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CSPG5O95196 566 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 FLT3P36888 993 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF782Q6ZMW2 699 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 MEI4A8MW99 385 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 F10P00742 488 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 MAPK10P53779 464 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SSBP1Q04837 148 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 INO80DQ53TQ3 878 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TRIQKQ629K1 86 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 AZI2Q9H6S1 392 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 UNC13BO14795 1591 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 A0A088AWK7 358 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 HAT1O14929 419 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 DPM1O60762 260 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PRKD3O94806 890 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 MAGP20916 626 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF10P21506 573 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 GALNT4Q8N4A0 578 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CHTF18Q8WVB6 975 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SETDB2Q96T68 719 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ARL15Q9NXU5 204 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PSMD13Q9UNM6 376 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CYP1A1P04798 512 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SOX5P35711 763 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SSTP61278 116 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 MAGEB6Q8N7X4 407 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SMYD3Q9H7B4 428 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 MAFFQ9ULX9 164 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 DISP2A7MBM2 1401 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 RALAP11233 206 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PHKA2P46019 1235 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 MOGQ16653 247 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF280DQ6N043 979 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 GPN1Q9HCN4 374 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 FAM53CQ9NYF3 392 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 LEMD3Q9Y2U8 911 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 PDIA3P30101 505 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 LRRC71Q8N4P6 559 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CRELD1Q96HD1 420 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 THTPAQ9BU02 230 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 GCNT4Q9P109 453 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TELO2Q9Y4R8 837 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 KRBOX1C9JBD0 128 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 KCNK3O14649 394 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 SLC28A2O43868 658 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 JRKO75564 520 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 C6orf222P0C671 652 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TNNI3KQ59H18 835 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 DOK6Q6PKX4 331 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 R3HCC1LQ7Z5L2 792 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TRIM50Q86XT4 487 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 GALNT8Q9NY28 637 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CHPF2Q9P2E5 772 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 IFT52Q9Y366 437 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 FPGT-TNNI3KV9GXZ4 949 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CLIC2O15247 247 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 FDPSP14324 419 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 HOXB1P14653 301 aaPredicted RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TCF4P15884 667 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 HNF4AP41235 474 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CLK1P49759 484 aaKnown RBP3.82□□□□□ -1.8
SYNE1-207ENST00000367255 VBP1P61758 197 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 CDNFQ49AH0 187 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 LRRC66Q68CR7 880 aa3.82□□□□□ -1.8
SYNE1-207ENST00000367255 TIGD3Q6B0B8 471 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms