RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CYTH4Q9UIA0 394 aa21.76■■□□□ 1.07
CD47-202ENST00000361309 SARDHQ9UL12 918 aa21.76■■□□□ 1.07
CD47-202ENST00000361309 KCNU1A8MYU2 1149 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 E5RJQ4 531 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 PRB1P04280 392 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 KRT5P13647 590 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 CKMT2P17540 419 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 PLK1P53350 603 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 YWHAZP63104 245 aaKnown RBP21.75■■□□□ 1.07
CD47-202ENST00000361309 ILKQ13418 452 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 RTP5Q14D33 572 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 STK32AQ8WU08 396 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 OR8D1Q8WZ84 308 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 PRMT1Q99873 361 aaKnown RBP21.75■■□□□ 1.07
CD47-202ENST00000361309 KDM4CQ9H3R0 1056 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.75■■□□□ 1.07
CD47-202ENST00000361309 SLC12A6Q9UHW9 1150 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 CNTN6Q9UQ52 1028 aa21.75■■□□□ 1.07
CD47-202ENST00000361309 SLC7A4O43246 635 aa21.74■■□□□ 1.07
CD47-202ENST00000361309 PLRG1O43660 514 aaKnown RBP21.74■■□□□ 1.07
CD47-202ENST00000361309 EIF4EBP2Q13542 120 aaPredicted RBP21.74■■□□□ 1.07
CD47-202ENST00000361309 TMEM110Q86TL2 294 aa21.74■■□□□ 1.07
CD47-202ENST00000361309 IQCHQ86VS3 1027 aa21.74■■□□□ 1.07
CD47-202ENST00000361309 MED15Q96RN5 788 aa21.74■■□□□ 1.07
CD47-202ENST00000361309 PRORYQ9H606 182 aa21.74■■□□□ 1.07
CD47-202ENST00000361309 DMTF1Q9Y222 760 aa21.74■■□□□ 1.07
CD47-202ENST00000361309 RAI2Q9Y5P3 530 aa21.74■■□□□ 1.07
CD47-202ENST00000361309 MGAQ8IWI9 3026 aa21.74■■□□□ 1.07
CD47-202ENST00000361309 A0A1B0GVM2 712 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 GOLGA6L4A6NEF3 574 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 TCAF2A6NFQ2 919 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 RRP8O43159 456 aaKnown RBP21.73■■□□□ 1.07
CD47-202ENST00000361309 MAGEC1O60732 1142 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 SDC3O75056 442 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 LETM1O95202 739 aaPredicted RBP21.73■■□□□ 1.07
CD47-202ENST00000361309 KCNH2Q12809 1159 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 CNTN1Q12860 1018 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 STAT4Q14765 748 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 TAF5Q15542 800 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 POM121L1PQ3SYA9 428 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 ACCSLQ4AC99 568 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 RABGAP1LQ5R372 815 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 TTC39BQ5VTQ0 682 aaPredicted RBP21.73■■□□□ 1.07
CD47-202ENST00000361309 FAM46CQ5VWP2 391 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 KLHL10Q6JEL2 608 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 CXorf57Q6NSI4 855 aaKnown RBP21.73■■□□□ 1.07
CD47-202ENST00000361309 TTI2Q6NXR4 508 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 DSG4Q86SJ6 1040 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 TRIM69Q86WT6 500 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 THAP9Q9H5L6 903 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 CA5BQ9Y2D0 317 aa21.73■■□□□ 1.07
CD47-202ENST00000361309 SYNJ2BP-COX16A0A087WUM0 186 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 MED7O43513 233 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 GLDCP23378 1020 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 NUDT1P36639 197 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 OXCT1P55809 520 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 CENPCQ03188 943 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 C19orf57Q0VDD7 668 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 OVGP1Q12889 678 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 MEA1Q16626 185 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 AGBL4Q5VU57 503 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 ZNF606Q8WXB4 792 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 SLC39A7Q92504 469 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 ALG14Q96F25 216 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 INTS2Q9H0H0 1204 aaKnown RBP21.72■■□□□ 1.07
CD47-202ENST00000361309 FAM204AQ9H8W3 233 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 COX16Q9P0S2 106 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 SLC25A13Q9UJS0 675 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 MAN1B1Q9UKM7 699 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 PPM1HQ9ULR3 514 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 CLCA2Q9UQC9 943 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 TRPM6Q9BX84 2022 aa21.72■■□□□ 1.07
CD47-202ENST00000361309 CFAP46Q8IYW2 2715 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 FLNBO75369 2602 aaKnown RBP21.71■■□□□ 1.07
CD47-202ENST00000361309 THAP12O43422 761 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 ATP9BO43861 1147 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 ZIC2O95409 532 aaPredicted RBP21.71■■□□□ 1.07
CD47-202ENST00000361309 ZNF18P17022 549 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 ACP1P24666 158 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 VASPP50552 380 aaPredicted RBP21.71■■□□□ 1.07
CD47-202ENST00000361309 CDK17Q00537 523 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 INSM1Q01101 510 aaPredicted RBP21.71■■□□□ 1.07
CD47-202ENST00000361309 DLG2Q15700 870 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 PROX2Q3B8N5 592 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 SETMARQ53H47 684 aaPredicted RBP21.71■■□□□ 1.07
CD47-202ENST00000361309 FBXL22Q6P050 247 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 TRIM59Q8IWR1 403 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 OR52K2Q8NGK3 314 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 SNIP1Q8TAD8 396 aaKnown RBP21.71■■□□□ 1.07
CD47-202ENST00000361309 RFFLQ8WZ73 363 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 BAP1Q92560 729 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 RNF34Q969K3 372 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 RPRD1AQ96P16 312 aaPredicted RBP21.71■■□□□ 1.07
CD47-202ENST00000361309 UBE2TQ9NPD8 197 aaPredicted RBP21.71■■□□□ 1.07
CD47-202ENST00000361309 ACP6Q9NPH0 428 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 DDIT4Q9NX09 232 aa21.71■■□□□ 1.07
CD47-202ENST00000361309 HOOK1Q9UJC3 728 aaKnown RBP21.71■■□□□ 1.07
CD47-202ENST00000361309 C1QTNF3-AMACRE9PGA6 284 aa21.7■■□□□ 1.06
CD47-202ENST00000361309 PRAMEF26H0Y7S4 382 aa21.7■■□□□ 1.06
CD47-202ENST00000361309 TRIM38O00635 465 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms