RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 LAMB3Q13751 1172 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 E2F4Q16254 413 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 SNRNP35Q16560 246 aaKnown RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 MS4A13Q5J8X5 152 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 NADSYN1Q6IA69 706 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 MAMDC2Q7Z304 686 aaPredicted RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 PRICKLE2Q7Z3G6 844 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 ADAT2Q7Z6V5 191 aaKnown RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 PARGQ86W56 976 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 ARL10Q8N8L6 244 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 PARD3BQ8TEW8 1205 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 FCRL2Q96LA5 508 aaPredicted RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 ABCC13Q9NSE7 274 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 LIMCH1Q9UPQ0 1083 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 ZFR2Q9UPR6 939 aaKnown RBP6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 TLR6Q9Y2C9 796 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 TBC1D30Q9Y2I9 924 aa6.18□□□□□ -1.42
CDC42SE2-201ENST00000360515 SHANK1Q9Y566 2161 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 C9orf172C9J069 976 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 TNFSF15O95150 251 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 WT1P19544 449 aaPredicted RBP6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 AKT2P31751 481 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 CD70P32970 193 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 PTGER4P35408 488 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 B4GALNT1Q00973 533 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 MCM6Q14566 821 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 PERM1Q5SV97 790 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 BRAPQ7Z569 592 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 ANKRD52Q8NB46 1076 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 PLEKHO2Q8TD55 490 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 NKD1Q969G9 470 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 ISG20Q96AZ6 181 aaKnown RBP6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 C7orf25Q9BPX7 421 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 TREX2Q9BQ50 279 aaPredicted RBP6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 SMYD3Q9H7B4 428 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 ASNSD1Q9NWL6 643 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 DONSONQ9NYP3 566 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 MARCH2Q9P0N8 246 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 SRPRBQ9Y5M8 271 aaKnown RBP6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 NAV2Q8IVL1 2488 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 GOLGA8CPA6NN73 597 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 KCNK3O14649 394 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 ACSL4O60488 711 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 LUC7L3O95232 432 aaKnown RBP6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 TBX18O95935 607 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 KCNA1Q09470 495 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 TPGS1Q6ZTW0 290 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 WFDC5Q8TCV5 224 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 CENPTQ96BT3 561 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 TEFMQ96QE5 360 aaKnown RBP6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 PCDHGA9Q9Y5G4 932 aaKnown RBP6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 ASXL3Q9C0F0 2248 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 DLGAP3O95886 979 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 CSKP41240 450 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 MYL6P60660 151 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 ECT2LQ008S8 904 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 MC1RQ01726 317 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 STK3Q13188 491 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 MACC1Q6ZN28 852 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 ATCAYQ86WG3 371 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 CBWD2Q8IUF1 395 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 ZNF683Q8IZ20 524 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 BMPERQ8N8U9 685 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 SLC2A14Q8TDB8 520 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 AGAP3Q96P47 875 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 TRIM62Q9BVG3 475 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 ABCB8Q9NUT2 735 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 FBXO2Q9UK22 296 aaPredicted RBP6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 ENTPD4Q9Y227 616 aa6.17□□□□□ -1.42
CDC42SE2-201ENST00000360515 AQP9O43315 295 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 PRPF6O94906 941 aaKnown RBP6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 PDGFRBP09619 1106 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 MAP4P27816 1152 aaKnown RBP6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 ATP1A2P50993 1020 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 PTK2BQ14289 1009 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 EFHC2Q5JST6 749 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 EFL1Q7Z2Z2 1120 aaKnown RBP6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 XXYLT1Q8NBI6 393 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 C9orf43Q8TAL5 461 aaPredicted RBP6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 PPP1R9BQ96SB3 815 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 FOXD4L1Q9NU39 408 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 COQ4Q9Y3A0 265 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 A0A1W2PP55 124 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 FAM221AA4D161 298 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 KCNU1A8MYU2 1149 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 LDLRP01130 860 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 TRIM21P19474 475 aaKnown RBP6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 GPR3P46089 330 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 ARSDP51689 593 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 ABHD18Q0P651 414 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 STAT4Q14765 748 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 DCAF6Q58WW2 860 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 MANEAQ5SRI9 462 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 BNIPLQ7Z465 357 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 STK32AQ8WU08 396 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 TMA16Q96EY4 203 aaKnown RBP6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 TAAR9Q96RI9 348 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 SPASTQ9UBP0 616 aa6.16□□□□□ -1.42
CDC42SE2-201ENST00000360515 CNTN6Q9UQ52 1028 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms