RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 DNAJC3Q13217 504 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 MFSD10Q14728 455 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 RINLQ6ZS11 566 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 RD3Q7Z3Z2 195 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 F8VZ95 297 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 FAM58BPP0C7Q3 252 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 ACLYP53396 1101 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 GLT6D1Q7Z4J2 308 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 MID1IP1Q9NPA3 183 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 BAIAP3O94812 1187 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 S100A3P33764 101 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 NME5P56597 212 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 SPOCD1Q6ZMY3 1216 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 SYT15Q9BQS2 421 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 MBD5Q9P267 1494 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 ARHGEF17Q96PE2 2063 aaPredicted RBP9.84□□□□□ -0.83
CUX1-203ENST00000360264 CSF1RP07333 972 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 GSTM5P46439 218 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 RORBQ92753 470 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 SGF29Q96ES7 293 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 PPP3R2Q96LZ3 170 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 KLHL1Q9NR64 748 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 CATSPERZQ9NTU4 200 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 CCDC162PA2VCL2 907 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 MICAL2O94851 1124 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 ZNF605Q86T29 641 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 HTR3CQ8WXA8 447 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 TDRKHQ9Y2W6 561 aaKnown RBP9.84□□□□□ -0.83
CUX1-203ENST00000360264 PSMB9P28065 219 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 LGALS3BPQ08380 585 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 KCNMA1Q12791 1236 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 RIPOR1Q6ZS17 1223 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 TC2NQ8N9U0 490 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 ZSCAN18Q8TBC5 510 aaPredicted RBP9.84□□□□□ -0.83
CUX1-203ENST00000360264 C1orf50Q9BV19 199 aa9.84□□□□□ -0.83
CUX1-203ENST00000360264 PPP1R3GB7ZBB8 358 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 H3BNH8 94 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 DPEP1P16444 411 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 ACSM2AQ08AH3 577 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 BOP1Q14137 746 aaKnown RBP9.83□□□□□ -0.84
CUX1-203ENST00000360264 RFX4Q33E94 735 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 ACSM2BQ68CK6 577 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 ADAM28Q9UKQ2 775 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 PCDHGB3Q9Y5G1 929 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 TRIM43BA6NCK2 446 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 SULT2A1Q06520 285 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 SPIDRQ14159 915 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 OPTCQ9UBM4 332 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 RPS6KA6Q9UK32 745 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 DLC1Q96QB1 1528 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 SPATA31A5Q5VU36 1347 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 SPATA31A7Q8IWB4 1347 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 CLCN3P51790 818 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 EIF3MQ7L2H7 374 aaKnown RBP9.83□□□□□ -0.84
CUX1-203ENST00000360264 CRELD1Q96HD1 420 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 PDLIM2Q96JY6 352 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 UROC1Q96N76 676 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 SPATC1LQ9H0A9 340 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 ARL15Q9NXU5 204 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 NR2E3Q9Y5X4 410 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 ADCY6O43306 1168 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 SGPL1O95470 568 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 LDLRP01130 860 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 AMHR2Q16671 573 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 TBCELQ5QJ74 424 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 EXOC3L1Q86VI1 746 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 FAM20CQ8IXL6 584 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 ACOX2Q99424 681 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 ADAM33Q9BZ11 813 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 CRNNQ9UBG3 495 aaPredicted RBP9.83□□□□□ -0.84
CUX1-203ENST00000360264 SNAP23O00161 211 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 TNFAIP8O95379 198 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 TRIM10Q9UDY6 481 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 LIMD1Q9UGP4 676 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 IRAK3Q9Y616 596 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 PDHXO00330 501 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 LRPAP1P30533 357 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 MTAPQ13126 283 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 DGKKQ5KSL6 1271 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 IL27RAQ6UWB1 636 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 TRAPPC5Q8IUR0 188 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 ATP8B4Q8TF62 1192 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 PHF21BQ96EK2 531 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 CBWD1Q9BRT8 395 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 CMTM6Q9NX76 183 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 KIAA1210Q9ULL0 1709 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 KPNA4O00629 521 aaPredicted RBP9.83□□□□□ -0.84
CUX1-203ENST00000360264 CCR3P51677 355 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 MTF1Q14872 753 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 RERGLQ9H628 205 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 NOTCH3Q9UM47 2321 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 CACNA1GO43497 2377 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 ANXA5P08758 320 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 FAM46CQ5VWP2 391 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 ZNF470Q6ECI4 717 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 C2orf49Q9BVC5 232 aaPredicted RBP9.83□□□□□ -0.84
CUX1-203ENST00000360264 TNFSF13BQ9Y275 285 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 SLC9A8Q9Y2E8 581 aa9.83□□□□□ -0.84
CUX1-203ENST00000360264 CLTCQ00610 1675 aaKnown RBP9.83□□□□□ -0.84
CUX1-203ENST00000360264 H3BN98 237 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms