RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SNX15Q9NRS6 342 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 NCKIPSDQ9NZQ3 722 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 SMCHD1A6NHR9 2005 aa12.5□□□□□ -0.41
COL20A1-201ENST00000358894 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.49□□□□□ -0.41
COL20A1-201ENST00000358894 ANGPT2O15123 496 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 AKAP10O43572 662 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 PKNOX1P55347 436 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 SLC25A52Q3SY17 297 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 CXCL17Q6UXB2 119 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 SMARCD1Q96GM5 515 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 ZNF184Q99676 751 aaPredicted RBP12.49□□□□□ -0.41
COL20A1-201ENST00000358894 OMDQ99983 421 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 CADM1Q9BY67 442 aaKnown RBP12.49□□□□□ -0.41
COL20A1-201ENST00000358894 EFCAB1Q9HAE3 211 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 ARHGEF4Q9NR80 690 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 DTLQ9NZJ0 730 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 CACNG4Q9UBN1 327 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 PLA2G4CQ9UP65 541 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 MDM4O15151 490 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 FKBP6O75344 327 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 DDHD2O94830 711 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 TUBP50607 506 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 ZNF132P52740 706 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 VWA5B1Q5TIE3 1220 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 TMC7Q7Z402 723 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 GSTCDQ8NEC7 633 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 CDC26Q8NHZ8 85 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 CAAP1Q9H8G2 361 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 MORF4L1Q9UBU8 362 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 SLC15A5A6NIM6 579 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 SH3BP5O60239 455 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 DARSP14868 501 aaKnown RBP12.49□□□□□ -0.41
COL20A1-201ENST00000358894 SOWAHAQ2M3V2 549 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 DUSP28Q4G0W2 176 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 AGAP9Q5VTM2 703 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 SETD3Q86TU7 594 aaPredicted RBP12.49□□□□□ -0.41
COL20A1-201ENST00000358894 ULK2Q8IYT8 1036 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 ZNF112Q9UJU3 913 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 HBS1LQ9Y450 684 aaKnown RBP12.49□□□□□ -0.41
COL20A1-201ENST00000358894 C10orf71Q711Q0 1435 aa12.49□□□□□ -0.41
COL20A1-201ENST00000358894 USP1O94782 785 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 PGM3O95394 542 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 TOP3BO95985 862 aaKnown RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 AXLP30530 894 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 CCR1P32246 355 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 HDAC4P56524 1084 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 CTBP1Q13363 440 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 CDCA2Q69YH5 1023 aaPredicted RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 OLFML1Q6UWY5 402 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 RINLQ6ZS11 566 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 BHMTQ93088 406 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 MFSD3Q96ES6 412 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 CDRT15Q96T59 188 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 DUSP16Q9BY84 665 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 NMRK1Q9NWW6 199 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 TAS2R1Q9NYW7 299 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 TRHDEQ9UKU6 1024 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 V9GYQ6 96 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 E7ENQ6 273 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 TREHO43280 583 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 NDUFS3O75489 264 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 MMP3P08254 477 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 RAG1P15918 1043 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 EPHA3P29320 983 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 PTPN7P35236 360 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 ADRA1BP35368 520 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 CD151P48509 253 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 GRIK3Q13003 919 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 PPP1R15BQ5SWA1 713 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 ARCQ7LC44 396 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 STRADAQ7RTN6 431 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 KYQ8NBH2 561 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 AZIN2Q96A70 460 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 ZNF512Q96ME7 567 aaPredicted RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 UBE2OQ9C0C9 1292 aaKnown RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 MRPL40Q9NQ50 206 aaKnown RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 ADGRA2Q96PE1 1338 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 MYO18AQ92614 2054 aaKnown RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 A0A0G2JLL6 359 aaPredicted RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 SUPT3HB4E1H0 165 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 GSTA4O15217 222 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 GPR182O15218 404 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 MPOP05164 745 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 GABRB2P47870 512 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 ADARP55265 1226 aaKnown RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 SNX17Q15036 470 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 MAPRE1Q15691 268 aaKnown RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 AGKQ53H12 422 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 SCARA3Q6AZY7 606 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 CCDC80Q76M96 950 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 PRRT2Q7Z6L0 340 aaPredicted RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 NR1H4Q96RI1 486 aaPredicted RBP12.48□□□□□ -0.41
COL20A1-201ENST00000358894 CCT7Q99832 543 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 BCO2Q9BYV7 579 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 TMPRSS4Q9NRS4 437 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 APPL1Q9UKG1 709 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 IPPQ9Y573 584 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 MAGEB16A2A368 324 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 TRPC5OSA6NMA1 111 aa12.48□□□□□ -0.41
COL20A1-201ENST00000358894 HNRNPRO43390 633 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms