RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 DNAJB3Q8WWF6 145 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 HSD17B14Q9BPX1 270 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 MIEF1Q9NQG6 463 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 UBA2Q9UBT2 640 aaPredicted RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 CASTOR2A6NHX0 329 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 F8VP50 259 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 PDHXO00330 501 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 C2CD2LO14523 706 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 IRF6O14896 467 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 ZCCHC18P0CG32 403 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 TCF3P15923 654 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 ADRA1DP25100 572 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 SOX11P35716 441 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 BLVRAP53004 296 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 PGS1Q32NB8 556 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 SH3BP5LQ7L8J4 393 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 SCUBE3Q8IX30 993 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 METTL6Q8TCB7 284 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 CATSPER2Q96P56 530 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 MID1IP1Q9NPA3 183 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 MORF4L1Q9UBU8 362 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 A0A087WXM4 84 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 ZNF682O95780 498 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 LGALS2P05162 132 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 PABPC1P11940 636 aaKnown RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 UBA1P22314 1058 aaKnown RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 MMP13P45452 471 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 ITGB3BPQ13352 177 aaPredicted RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 PDK4Q16654 411 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 PABPC1LQ4VXU2 614 aaKnown RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 PAN2Q504Q3 1202 aaKnown RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 CELF3Q5SZQ8 465 aaKnown RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 GJC2Q5T442 439 aaPredicted RBP11.95□□□□□ -0.5
COL9A1-202ENST00000357250 TLK2Q86UE8 772 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 FUKQ8N0W3 1084 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 TMEM132CQ8N3T6 1108 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 GDPD5Q8WTR4 605 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 RNF157Q96PX1 679 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 ACOX2Q99424 681 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 MYLK2Q9H1R3 596 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 MYRFQ9Y2G1 1151 aa11.95□□□□□ -0.5
COL9A1-202ENST00000357250 CCDC154A6NI56 674 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 CLOCKO15516 846 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 RECQL5O94762 991 aaPredicted RBP11.94□□□□□ -0.5
COL9A1-202ENST00000357250 EPB42P16452 691 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 ITGB5P18084 799 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 TRAF2Q12933 501 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 CATSPERGQ6ZRH7 1159 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 OR6Y1Q8NGX8 325 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 STAG3L4Q8TBR4 150 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 EDEM1Q92611 657 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 KAT5Q92993 513 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 CELF6Q96J87 481 aaKnown RBP11.94□□□□□ -0.5
COL9A1-202ENST00000357250 FGFBP2Q9BYJ0 223 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 ACSS3Q9H6R3 686 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 ADPRHL2Q9NX46 363 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 USE1Q9NZ43 259 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 TCHHQ07283 1943 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 TRIM24O15164 1050 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 SYNCRIPO60506 623 aaKnown RBP11.94□□□□□ -0.5
COL9A1-202ENST00000357250 SERPINI2O75830 405 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 KRT75O95678 551 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 GLRA2P23416 452 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 NEK3P51956 506 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 RIPOR1Q6ZS17 1223 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 PIWIL4Q7Z3Z4 852 aaKnown RBP11.94□□□□□ -0.5
COL9A1-202ENST00000357250 MILR1Q7Z6M3 343 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 DSG4Q86SJ6 1040 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 LRRC52Q8N7C0 313 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 FNDC5Q8NAU1 212 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 COPS5Q92905 334 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 TNFRSF25Q93038 417 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 ZNF184Q99676 751 aaPredicted RBP11.94□□□□□ -0.5
COL9A1-202ENST00000357250 YIPF2Q9BWQ6 316 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 UBP1Q9NZI7 540 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 TMEM216Q9P0N5 145 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 CDH9Q9ULB4 789 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 PCDHA11Q9Y5I1 949 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 PTCH2Q9Y6C5 1203 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 PNMA8CA0A1B0GUJ8 204 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 ZNF862O60290 1169 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 UNC5CO95185 931 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 NPR3P17342 541 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 PTPN1P18031 435 aaKnown RBP11.94□□□□□ -0.5
COL9A1-202ENST00000357250 LBPP18428 481 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 ATP5F1P24539 256 aaPredicted RBP11.94□□□□□ -0.5
COL9A1-202ENST00000357250 ADORA2AP29274 412 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 ACVR2BQ13705 512 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 GLMNQ92990 594 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 C19orf60Q96EN9 201 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 SENP8Q96LD8 212 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 QRFPRQ96P65 431 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 RNPEPL1Q9HAU8 725 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 KLHL3Q9UH77 587 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 KCNK1O00180 336 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 CPSF4O95639 269 aaKnown RBP11.94□□□□□ -0.5
COL9A1-202ENST00000357250 LTA4HP09960 611 aaKnown RBP11.94□□□□□ -0.5
COL9A1-202ENST00000357250 CES1P23141 567 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 DGKAP23743 735 aa11.94□□□□□ -0.5
COL9A1-202ENST00000357250 DDR2Q16832 855 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms