RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 WWOXQ9NZC7 414 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SLAIN2Q9P270 581 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 CCNB1P14635 433 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 CCNG1P51959 295 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 KCNA1Q09470 495 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 C5orf22Q49AR2 442 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 PAGE2BQ5JRK9 111 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 ANGEL2Q5VTE6 544 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 DUPD1Q68J44 220 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 FASTKD5Q7L8L6 764 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 ERI1Q8IV48 349 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 CHST13Q8NET6 341 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 CREB3L1Q96BA8 519 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 DCPSQ96C86 337 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 THUMPD1Q9NXG2 353 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 EGFRP00533 1210 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 CDC16Q13042 620 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 TMEM119Q4V9L6 283 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 STX12Q86Y82 276 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 RAP2CQ9Y3L5 183 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 BCLAF3A2AJT9 711 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 MRASO14807 208 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 GLRA4Q5JXX5 417 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SLC27A3Q5K4L6 730 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 IPCEF1Q8WWN9 437 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 SLC9A8Q9Y2E8 581 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 PPRC1Q5VV67 1664 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 IFNA16P05015 189 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 PAICSP22234 425 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 NFYCQ13952 458 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 AGKQ53H12 422 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 ADAMTSL2Q86TH1 951 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 FAM71AQ8IYT1 594 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 TRPS1Q9UHF7 1281 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 MAN2B2Q9Y2E5 1009 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 ALOX15BO15296 676 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 DYRK3O43781 588 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 AKAP8O43823 692 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 MTA2O94776 668 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 TRIM25Q14258 630 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 TRABD2AQ86V40 505 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 MPP5Q8N3R9 675 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 ENDOVQ8N8Q3 282 aaKnown RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 AFG1LQ8WV93 481 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 RIN2Q8WYP3 895 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-202ENST00000357162 TLCD1Q96CP7 247 aa6.68□□□□□ -1.34
VPS13B-202ENST00000357162 ATG7O95352 703 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 PPARDQ03181 441 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ZDHHC20Q5W0Z9 365 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 RIPOR1Q6ZS17 1223 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 LRRC55Q6ZSA7 311 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 FIS1Q9Y3D6 152 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 MTF2Q9Y483 593 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 THRBP10828 461 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 FECHP22830 423 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 MAPKAPK2P49137 400 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CREMQ03060 361 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ZFP69Q49AA0 526 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF720Q7Z2F6 126 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 GLB1L3Q8NCI6 653 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 PANX3Q96QZ0 392 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CLPBQ9H078 707 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF221Q9UK13 617 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 TRIM38O00635 465 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 GABRB2P47870 512 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 POU5F1Q01860 360 aaKnown RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 MTERF2Q49AM1 385 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 SH3RF1Q7Z6J0 888 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ALLCQ8N6M5 410 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ELMO2Q96JJ3 720 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 MMTAG2Q9BU76 263 aaKnown RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 NUDT5Q9UKK9 219 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 BAIAP2Q9UQB8 552 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 PLLPQ9Y342 182 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ANPEPP15144 967 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CLCN5P51795 746 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CYP24A1Q07973 514 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ABRQ12979 859 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 USP39Q53GS9 565 aaKnown RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF549Q6P9A3 640 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 KCTD1Q719H9 257 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 GET4Q7L5D6 327 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 OR2T34Q8NGX1 318 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 OR2T3Q8NH03 318 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CLHC1Q8NHS4 586 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CLPTM1LQ96KA5 538 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ARHGEF3Q9NR81 526 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 ATPIF1Q9UII2 106 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 AP1M2Q9Y6Q5 423 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 OGTO15294 1046 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 NOS1APO75052 506 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CABYRO75952 493 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 CTDNEP1O95476 244 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 LYPLAL1Q5VWZ2 237 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 DENND5AQ6IQ26 1287 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 LINC00299Q6ZSB3 139 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 THAP5Q7Z6K1 395 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 DPP9Q86TI2 863 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 EGFL6Q8IUX8 553 aa6.67□□□□□ -1.34
VPS13B-202ENST00000357162 TDRD1Q9BXT4 1180 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms