RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 VPS33AQ96AX1 596 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 FBXO6Q9NRD1 293 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-201ENST00000351677 SH3BP4Q9P0V3 963 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 TUBGCP4Q9UGJ1 667 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 A0A087X1B8 175 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 NOL4O94818 638 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 RRM2P31350 389 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 CD86P42081 329 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 NAGLUP54802 743 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 NUP107P57740 925 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 KCNJ2P63252 427 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 PPIL2Q13356 520 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 HGSNATQ68CP4 663 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 MOB2Q70IA6 237 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 TRIM69Q86WT6 500 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 APLFQ8IW19 511 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-201ENST00000351677 SENP6Q9GZR1 1112 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-201ENST00000351677 COPS7BQ9H9Q2 264 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-201ENST00000351677 MARCH2Q9P0N8 246 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 RASSF9O75901 435 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 MSH3P20585 1137 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 SERPINB1P30740 379 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 BBS12Q6ZW61 710 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 JOSD2Q8TAC2 188 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 LPPQ93052 612 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 C6orf203Q9P0P8 240 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-201ENST00000351677 TMCC3Q9ULS5 477 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 RBAK-RBAKDNI3L0D1 243 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 ABHD2P08910 425 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 IL5RAQ01344 420 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 PCID2Q5JVF3 399 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 MILR1Q7Z6M3 343 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 ITIH5Q86UX2 942 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 UCMAQ8WVF2 138 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 PRDM12Q9H4Q4 367 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 PALMDQ9NP74 551 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 SLCO1B3Q9NPD5 702 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 SEMA4BQ9NPR2 832 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-201ENST00000351677 CACNA2D2Q9NY47 1150 aa16.28■□□□□ 0.2
PTPN11-201ENST00000351677 SLC25A3Q00325 362 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 FAM98BQ52LJ0 330 aaKnown RBP16.27■□□□□ 0.2
PTPN11-201ENST00000351677 PLPPR4Q7Z2D5 763 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 PIWIL2Q8TC59 973 aaKnown RBP16.27■□□□□ 0.2
PTPN11-201ENST00000351677 HGH1Q9BTY7 390 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 POLR1EQ9GZS1 481 aaKnown RBP16.27■□□□□ 0.2
PTPN11-201ENST00000351677 YDJCA8MPS7 323 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 MRPS22P82650 360 aaKnown RBP16.27■□□□□ 0.2
PTPN11-201ENST00000351677 PPP1R26Q5T8A7 1209 aaPredicted RBP16.27■□□□□ 0.2
PTPN11-201ENST00000351677 RAP1GAP2Q684P5 730 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 FAM126BQ8IXS8 530 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 ANKRD52Q8NB46 1076 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 LNPEPQ9UIQ6 1025 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 LRCH1Q9Y2L9 728 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 SNX8Q9Y5X2 465 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 ACTL7BQ9Y614 415 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 SLIT3O75094 1523 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 TMEM114B3SHH9 223 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 SCAMP3O14828 347 aaKnown RBP16.27■□□□□ 0.2
PTPN11-201ENST00000351677 DDX3YO15523 660 aaKnown RBP16.27■□□□□ 0.2
PTPN11-201ENST00000351677 PSMG1O95456 288 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 HIRAP54198 1017 aaPredicted RBP16.27■□□□□ 0.2
PTPN11-201ENST00000351677 PLD1Q13393 1074 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 FOXR2Q6PJQ5 311 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 DDHD1Q8NEL9 900 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 MAGED4Q96JG8 741 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 SERAC1Q96JX3 654 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 HSFY1Q96LI6 401 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 ROGDIQ9GZN7 287 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 PLA2G4CQ9UP65 541 aa16.27■□□□□ 0.2
PTPN11-201ENST00000351677 A0A1W2PPM1 405 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 MANSC4A6NHS7 340 aaPredicted RBP16.27■□□□□ 0.19
PTPN11-201ENST00000351677 SNHG28P0DPA3 235 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 ATP4AP20648 1035 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 CENPAP49450 140 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 TRIM16LQ309B1 348 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 AGAP11Q8TF27 550 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 RNF145Q96MT1 663 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 CATSPERZQ9NTU4 200 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 PACSIN3Q9UKS6 424 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 KIF1AQ12756 1690 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 SH3BGRLO75368 114 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 BST1Q10588 318 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 PDK4Q16654 411 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 PFKFB4Q16877 469 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 OOSP2Q86WS3 158 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 SOCS4Q8WXH5 440 aa16.27■□□□□ 0.19
PTPN11-201ENST00000351677 MTFMTQ96DP5 389 aaKnown RBP16.27■□□□□ 0.19
PTPN11-201ENST00000351677 PLSCR1O15162 318 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 UNC5CO95185 931 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 ERBB2P04626 1255 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 ALDH9A1P49189 494 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 RNF43Q68DV7 783 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 PHACTR4Q8IZ21 702 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 ZNF614Q8N883 585 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 NDNQ99608 321 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 LIMD1Q9UGP4 676 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 CCNE2O96020 404 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 CYP1A1P04798 512 aaPredicted RBP16.26■□□□□ 0.19
PTPN11-201ENST00000351677 FGFR3P22607 806 aa16.26■□□□□ 0.19
PTPN11-201ENST00000351677 PRMT9Q6P2P2 845 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms