RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CTAGE3PQ8IX95 158 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 REXO1Q8N1G1 1221 aaKnown RBP10.86□□□□□ -0.67
CAPN3-203ENST00000349748 VPS33AQ96AX1 596 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 ZFYVE19Q96K21 471 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 TMEM246Q9BRR3 403 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 MIR1-1HGQ9H1L0 117 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 DDX28Q9NUL7 540 aaKnown RBP10.86□□□□□ -0.67
CAPN3-203ENST00000349748 ZHX2Q9Y6X8 837 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 SCN7AQ01118 1682 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 TCRBV9S1A1TA0A576 114 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 USP17L3A6NCW0 530 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 USP17L4A6NCW7 530 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 RIMBP2O15034 1052 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 ATP5BP06576 529 aaKnown RBP10.86□□□□□ -0.67
CAPN3-203ENST00000349748 BPGMP07738 259 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 TTKP33981 857 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 CYP2J2P51589 502 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 TAS2R40P59535 323 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 KLF10Q13118 480 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 AQP6Q13520 282 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 TUBA3CQ13748 450 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 ANO4Q32M45 955 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 TATDN1Q6P1N9 297 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 POTEGQ6S5H5 508 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 FKBP9P1Q75LS8 142 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 USP17L1Q7RTZ2 530 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 ARMC8Q8IUR7 673 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 ZCCHC7Q8N3Z6 543 aaKnown RBP10.86□□□□□ -0.67
CAPN3-203ENST00000349748 UBR7Q8N806 425 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 NAT16Q8N8M0 369 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 ADAM32Q8TC27 787 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 FBXL20Q96IG2 436 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 RTKNQ9BST9 563 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 SEZ6LQ9BYH1 1024 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 OR2B2Q9GZK3 357 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 C6orf50Q9HD87 102 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 FETUBQ9UGM5 382 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 SFMBT1Q9UHJ3 866 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 KIF13BQ9NQT8 1826 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 GOLGA8JA6NMD2 632 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 SGK1O00141 431 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 POLR1CO15160 346 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-203ENST00000349748 SLC16A3O15427 465 aaKnown RBP10.86□□□□□ -0.67
CAPN3-203ENST00000349748 B4GAT1O43505 415 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 CCNKO75909 580 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 KCNK2O95069 426 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 KRT8P05787 483 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 GSTM1P09488 218 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 DBTP11182 482 aaKnown RBP10.86□□□□□ -0.67
CAPN3-203ENST00000349748 ATF7P17544 494 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-203ENST00000349748 CLCNKBP51801 687 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 HK2P52789 917 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 RPL10AP62906 217 aaKnown RBP10.86□□□□□ -0.67
CAPN3-203ENST00000349748 VAC14Q08AM6 782 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 ATP13A4Q4VNC1 1196 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 ZFYVE27Q5T4F4 411 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 KCTD1Q719H9 257 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 GATAD2AQ86YP4 633 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 LGI2Q8N0V4 545 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 LINC00469Q8N7U9 141 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 TMEM35BQ8NCS4 154 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 OR5H6Q8NGV6 325 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 FAM110BQ8TC76 370 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 YME1L1Q96TA2 773 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 REEP2Q9BRK0 252 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 KIAA1551Q9HCM1 1747 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 SHOC2Q9UQ13 582 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 USTQ9Y2C2 406 aa10.86□□□□□ -0.67
CAPN3-203ENST00000349748 LAMB1P07942 1786 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 SAC3D1A6NKF1 404 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 TGFB1I1O43294 461 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 BCAS2O75934 225 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-203ENST00000349748 WEE2P0C1S8 567 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 TMEM191BP0C7N4 346 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 PCP11498 1178 aaKnown RBP10.85□□□□□ -0.67
CAPN3-203ENST00000349748 SPNP16150 400 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 M6PRP20645 277 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 GARTP22102 1010 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 IL32P24001 234 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 PSMC6P62333 389 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 FMO1Q01740 532 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 GALNT1Q10472 559 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-203ENST00000349748 SLX4IPQ5VYV7 408 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 SDE2Q6IQ49 451 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 KIAA0408Q6ZU52 694 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 PPM1NQ8N819 430 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 OR13F1Q8NGS4 319 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 SLC44A1Q8WWI5 657 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 SNX19Q92543 992 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 DPF3Q92784 378 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 ELMO3Q96BJ8 720 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 PPWD1Q96BP3 646 aaKnown RBP10.85□□□□□ -0.67
CAPN3-203ENST00000349748 ZNF560Q96MR9 790 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 CHID1Q9BWS9 393 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 PCDHAC1Q9H158 963 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 SP140LQ9H930 580 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 TMEM9Q9P0T7 183 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 SLCO3A1Q9UIG8 710 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 ENPP5Q9UJA9 477 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 NOCTQ9UK39 431 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 305.5 ms