RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 PCDHGA5Q9Y5G8 931 aa6.11□□□□□ -1.43
RFC1-201ENST00000349703 H0Y858 1186 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ZNF208O43345 1280 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 AGTP01019 485 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 SLC2A2P11168 524 aaPredicted RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 NQO1P15559 274 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 TCEA1P23193 301 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 TRPC1P48995 793 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 BCAP31P51572 246 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 XRCC4Q13426 336 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 LAMB3Q13751 1172 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 SMAD2Q15796 467 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 TBCEQ15813 527 aaPredicted RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 SPDYCQ5MJ68 293 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 EXOSC6Q5RKV6 272 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 TMTC4Q5T4D3 741 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ALKBH5Q6P6C2 394 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 KLHL35Q6PF15 583 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 PIK3AP1Q6ZUJ8 805 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 DNAJC22Q8N4W6 341 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ARL6IP6Q8N6S5 226 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 MAB21L3Q8N8X9 362 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ING5Q8WYH8 240 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 LZICQ8WZA0 190 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 SPSB4Q96A44 273 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 KLHDC7BQ96G42 594 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 GCNAQ96QF7 691 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 FSD1LQ9BXM9 530 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 RSAD1Q9HA92 442 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 TLR9Q9NR96 1032 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ZCCHC3Q9NUD5 404 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 NDUFAF4Q9P032 175 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 RUVBL2Q9Y230 463 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 IPPQ9Y573 584 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 FKBP7Q9Y680 259 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 CEP170BQ9Y4F5 1589 aaPredicted RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 TCRBV16S1A1N1A0A5B0 115 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 TRAPPC3O43617 180 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 PFDN1O60925 122 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 NDUFS3O75489 264 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 DCTN3O75935 186 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 RFX3P48380 749 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ACTR2P61160 394 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ELF3P78545 371 aaPredicted RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 IL9RQ01113 521 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ZC3H12AQ5D1E8 599 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 FIGNQ5HY92 759 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 FAM91A1Q658Y4 838 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 SLITRK4Q8IW52 837 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 CCDC120Q96HB5 630 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ITCHQ96J02 903 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 AK8Q96MA6 479 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 SFXN2Q96NB2 322 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 LRRC37BQ96QE4 947 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 GFM1Q96RP9 751 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 CINPQ9BW66 212 aaPredicted RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 ZNF576Q9H609 170 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ITGA11Q9UKX5 1188 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 PCDHB2Q9Y5E7 798 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 OVOS2A0A0J9YW53 1432 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 OVOS2Q6IE36 1432 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 NEO1Q92859 1461 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 AGAP5A6NIR3 686 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 M0R3H8 397 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 CYP26A1O43174 497 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 CALCAP01258 141 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 IFNB1P01574 187 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 HMGCRP04035 888 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 CSF2RBP32927 897 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 KCNC1P48547 511 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 MOGSQ13724 837 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 FLYWCH1Q4VC44 716 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 GALNT17Q6IS24 598 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 SLC25A24Q6NUK1 477 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 MTHFD1LQ6UB35 978 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 KIAA0907Q7Z7F0 614 aaPredicted RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 NME8Q8N427 588 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 SMYD1Q8NB12 490 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 TNIP2Q8NFZ5 429 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 PDCD6IPQ8WUM4 868 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 TMEM171Q8WVE6 324 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 HNRNPABQ99729 332 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 MCCC2Q9HCC0 563 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 GDF3Q9NR23 364 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 VPS54Q9P1Q0 977 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 THEGQ9P2T0 379 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ANGPTL2Q9UKU9 493 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ARL2BPQ9Y2Y0 163 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 LYVE1Q9Y5Y7 322 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 USP3Q9Y6I4 520 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 SMIM22K7EJ46 135 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 O00370 1275 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 PEX10O60683 326 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 AOC2O75106 756 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 IL2RBP14784 551 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 GJA4P35212 333 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 GPSM2P81274 684 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ROR2Q01974 943 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 ACSM2AQ08AH3 577 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 KCNC3Q14003 757 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms