RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 AMPD2Q01433 879 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 TRADDQ15628 312 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 FAM122CQ6P4D5 195 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 TAF8Q7Z7C8 310 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 UBP1Q9NZI7 540 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 EHD3Q9NZN3 535 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 PXDNQ92626 1479 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 B8ZZF3 427 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 WNT10BO00744 389 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 DDX39BQ13838 428 aaKnown RBP11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 MTFR1Q15390 333 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 TXNDC11Q6PKC3 985 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 SLFN11Q7Z7L1 901 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 KBTBD7Q8WVZ9 684 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 EDEM1Q92611 657 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 PGLYRP2Q96PD5 576 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 CLK4Q9HAZ1 481 aaKnown RBP11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 WDR6Q9NNW5 1121 aaKnown RBP11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 LOC100653049A0A140TA62 436 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 TCRBV5S4A2TA0A5A2 114 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 KRT34O76011 436 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 IFNA14P01570 189 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 URODP06132 367 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 GSTT2P0CG29 244 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 GSTT2BP0CG30 244 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 DSG3P32926 999 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 ABCE1P61221 599 aaKnown RBP11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 PKN1Q16512 942 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 ARMC6Q6NXE6 501 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 ZNF720Q7Z2F6 126 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 LRRC17Q8N6Y2 441 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 FNDC8Q8TC99 324 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 CISHQ9NSE2 258 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 FAIMQ9NVQ4 179 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 TOR4AQ9NXH8 423 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 ZNF222Q9UK12 451 aa11.28□□□□□ -0.6
SMARCE1-202ENST00000348513 WTIPA6NIX2 430 aaPredicted RBP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 DNM1LO00429 736 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 CAPN15O75808 1086 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 AKAP3O75969 853 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 CLUP10909 449 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 MYL4P12829 197 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 PSMB9P28065 219 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 POU4F1Q01851 419 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 TP53BP2Q13625 1128 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 PTK6Q13882 451 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 CLEC16AQ2KHT3 1053 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 AARS2Q5JTZ9 985 aaKnown RBP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 SPDYCQ5MJ68 293 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 RAB43Q86YS6 212 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 TRIM48Q8IWZ4 208 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 TSEN2Q8NCE0 465 aaKnown RBP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 PNPT1Q8TCS8 783 aaKnown RBP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 MRPS31Q92665 395 aaKnown RBP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 AKAP1Q92667 903 aaKnown RBP eCLIP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 FAM162AQ96A26 154 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 CIDECQ96AQ7 238 aaPredicted RBP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 OTUB1Q96FW1 271 aaPredicted RBP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 P2RX7Q99572 595 aaKnown RBP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 OSGEPQ9NPF4 335 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 CHST12Q9NRB3 414 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 WWOXQ9NZC7 414 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 KLHL3Q9UH77 587 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 SAGE2PA6NJ88 616 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 ARHGEF33A8MVX0 844 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 CHRNB1P11230 501 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 CNTN2Q02246 1040 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 QPCTQ16769 361 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 BOLA3Q53S33 107 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 PYHIN1Q6K0P9 492 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 METTL7BQ6UX53 244 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 PYDC1Q8WXC3 89 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 SYN2Q92777 582 aaPredicted RBP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 CEP41Q9BYV8 373 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 SAV1Q9H4B6 383 aaPredicted RBP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 SERHL2Q9H4I8 314 aa11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 MRPS7Q9Y2R9 242 aaKnown RBP11.27□□□□□ -0.6
SMARCE1-202ENST00000348513 FRMPD1Q5SYB0 1578 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 ATP5BP06576 529 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 ZNF3P17036 446 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 RRM1P23921 792 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 ADORA2AP29274 412 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 GLRBP48167 497 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 TRIP4Q15650 581 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 TTI2Q6NXR4 508 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 ARRDC4Q8NCT1 418 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 I3L521 148 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 ANXA9O76027 345 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 NPR2P20594 1047 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 PTPN5P54829 565 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 OCLNQ16625 522 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 TAF2Q6P1X5 1199 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 TTC7BQ86TV6 843 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 PCSK9Q8NBP7 692 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 ZNF333Q96JL9 665 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 UNKQ9C0B0 810 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 GPAMQ9HCL2 828 aa11.27□□□□□ -0.61
SMARCE1-202ENST00000348513 RAB26Q9ULW5 256 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms