RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 TRAV19A0A0A6YYK7 116 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 CCDC195A0A1B0GUA6 201 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 DFFAO00273 331 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 ZBTB24O43167 697 aaPredicted RBP11.24□□□□□ -0.61
ECM1-201ENST00000346569 RIPK2O43353 540 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 XYLBO75191 536 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 CLDN11O75508 207 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 STK10O94804 968 aaKnown RBP11.24□□□□□ -0.61
ECM1-201ENST00000346569 NUDT17P0C025 328 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 CCNB1P14635 433 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 TPSB2P20231 275 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 DDX6P26196 483 aaKnown RBP eCLIP11.24□□□□□ -0.61
ECM1-201ENST00000346569 MAGEA4P43358 317 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 CDK16Q00536 496 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 TNK2Q07912 1038 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 ZBTB17Q13105 803 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 TPSAB1Q15661 275 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 KYNUQ16719 465 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 MSS51Q4VC12 460 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 STXBP5Q5T5C0 1151 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 UBAP2Q5T6F2 1119 aaKnown RBP11.24□□□□□ -0.61
ECM1-201ENST00000346569 ARHGEF18Q6ZSZ5 1173 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 TFAP2DQ7Z6R9 452 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 RBM23Q86U06 439 aaKnown RBP11.24□□□□□ -0.61
ECM1-201ENST00000346569 CAND1Q86VP6 1230 aaKnown RBP11.24□□□□□ -0.61
ECM1-201ENST00000346569 CCDC25Q86WR0 208 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 CIR1Q86X95 450 aaPredicted RBP11.24□□□□□ -0.61
ECM1-201ENST00000346569 CFAP52Q8N1V2 620 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 UBLCP1Q8WVY7 318 aaPredicted RBP11.24□□□□□ -0.61
ECM1-201ENST00000346569 ARNTL2Q8WYA1 636 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 DDX50Q9BQ39 737 aaKnown RBP11.24□□□□□ -0.61
ECM1-201ENST00000346569 GORASP1Q9BQQ3 440 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 FRMD8Q9BZ67 464 aaPredicted RBP11.24□□□□□ -0.61
ECM1-201ENST00000346569 ACBD3Q9H3P7 528 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 TASP1Q9H6P5 420 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 TLE6Q9H808 572 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 SEPT10Q9P0V9 454 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 IPO11Q9UI26 975 aaKnown RBP11.24□□□□□ -0.61
ECM1-201ENST00000346569 PLAAQ9Y263 795 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 ZNF510Q9Y2H8 683 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 ZFP37Q9Y6Q3 630 aaPredicted RBP11.24□□□□□ -0.61
ECM1-201ENST00000346569 GBF1Q92538 1859 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 CHD9Q3L8U1 2897 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 DENND4CQ5VZ89 1909 aa11.24□□□□□ -0.61
ECM1-201ENST00000346569 NOTCH4Q99466 2003 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 GOLGA6BA6NDN3 693 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 ARHGAP42A6NI28 874 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 GOLGA8MH3BSY2 632 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 TRDMT1O14717 391 aaKnown RBP11.23□□□□□ -0.61
ECM1-201ENST00000346569 IRF1P10914 325 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 OR1E1P30953 314 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 MAGEA3P43357 314 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 SGSHP51688 502 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 ARL4CP56559 192 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 RPS24P62847 133 aaKnown RBP11.23□□□□□ -0.61
ECM1-201ENST00000346569 NTHL1P78549 312 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 SERINC3Q13530 473 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 HNRNPDQ14103 355 aaKnown RBP11.23□□□□□ -0.61
ECM1-201ENST00000346569 POLD3Q15054 466 aaPredicted RBP11.23□□□□□ -0.61
ECM1-201ENST00000346569 SLC5A9Q2M3M2 681 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 PARP15Q460N3 678 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 RABGAP1LQ5R372 815 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 FAXCQ5TGI0 409 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 PPP2R2DQ66LE6 453 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 KCTD11Q693B1 232 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 CENPUQ71F23 418 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 CHST9Q7L1S5 443 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 CMTM8Q8IZV2 173 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 ATPAF2Q8N5M1 289 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 TEX26Q8N6G2 289 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 OR52K2Q8NGK3 314 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 HMCESQ96FZ2 354 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 PRICKLE1Q96MT3 831 aaPredicted RBP11.23□□□□□ -0.61
ECM1-201ENST00000346569 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 TMEM109Q9BVC6 243 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 CEP41Q9BYV8 373 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 MAGEH1Q9H213 219 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 SLC28A3Q9HAS3 691 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 EIF2B3Q9NR50 452 aaKnown RBP11.23□□□□□ -0.61
ECM1-201ENST00000346569 DNAJC17Q9NVM6 304 aaKnown RBP11.23□□□□□ -0.61
ECM1-201ENST00000346569 NINJ2Q9NZG7 142 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 ARHGAP26Q9UNA1 814 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 TBC1D30Q9Y2I9 924 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 OBSL1O75147 1896 aa11.23□□□□□ -0.61
ECM1-201ENST00000346569 CHD7Q9P2D1 2997 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 ILVBLA1L0T0 632 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 H3BQF6 201 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 J3KR12 359 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 LEFTY2O00292 366 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 TSPAN3O60637 253 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 RAMP2O60895 175 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 APRTP07741 180 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 PSMB4P28070 264 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 IFNAR2P48551 515 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 EIF3BP55884 814 aaKnown RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 IL10RBQ08334 325 aa11.22□□□□□ -0.61
ECM1-201ENST00000346569 PDIA2Q13087 525 aaKnown RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 FASTKD3Q14CZ7 662 aaKnown RBP11.22□□□□□ -0.61
ECM1-201ENST00000346569 TEAD2Q15562 447 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms