RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 NDFIP2Q9NV92 336 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 ARL8BQ9NVJ2 186 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 DLEC1Q9Y238 1755 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 GABBR2O75899 941 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 SUPT7LO94864 414 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 CKMP06732 381 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 RALBP11234 206 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 GFAPP14136 432 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 DAOAP59103 153 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 RABGAP1LQ5R372 815 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 ESRP1Q6NXG1 681 aaKnown RBP13.58□□□□□ -0.23
CASC4-202ENST00000345795 RASAL3Q86YV0 1011 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 DENND1CQ8IV53 801 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 NPWQ8N729 165 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 EIF1ADQ8N9N8 165 aaKnown RBP13.58□□□□□ -0.23
CASC4-202ENST00000345795 OR52K2Q8NGK3 314 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 CASP10Q92851 521 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 HACD3Q9P035 362 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 SLC2A6Q9UGQ3 507 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 CHKBQ9Y259 395 aa13.58□□□□□ -0.23
CASC4-202ENST00000345795 DUSP11O75319 330 aaKnown RBP13.58□□□□□ -0.24
CASC4-202ENST00000345795 ZNF598Q86UK7 904 aaKnown RBP13.58□□□□□ -0.24
CASC4-202ENST00000345795 CAND1Q86VP6 1230 aaKnown RBP13.58□□□□□ -0.24
CASC4-202ENST00000345795 SOCS4Q8WXH5 440 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 CATSPER2Q96P56 530 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 TBC1D10AQ9BXI6 508 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 SLC4A5Q9BY07 1137 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 RXFP1Q9HBX9 757 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 MARCH2Q9P0N8 246 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 SSX2IPQ9Y2D8 614 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 MTO1Q9Y2Z2 717 aaKnown RBP13.58□□□□□ -0.24
CASC4-202ENST00000345795 ATP6V1G2O95670 118 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 ITGA2BP08514 1039 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 IL4RP24394 825 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 SPRP35270 261 aaPredicted RBP13.58□□□□□ -0.24
CASC4-202ENST00000345795 PGFP49763 221 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 ZBTB17Q13105 803 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 ZNF697Q5TEC3 545 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 CARNMT1Q8N4J0 409 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 CERS2Q96G23 380 aa13.58□□□□□ -0.24
CASC4-202ENST00000345795 CPA3P15088 417 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 PDK4Q16654 411 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 MAMDC4Q6UXC1 1216 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 FNIP1Q8TF40 1166 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 BRD8Q9H0E9 1235 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 LRRC40Q9H9A6 602 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 USP29Q9HBJ7 922 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 TMEM216Q9P0N5 145 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 CIDEBQ9UHD4 219 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 GTF2IRD1Q9UHL9 959 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 ATP8B3O60423 1300 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 GJB3O75712 270 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 AMHP03971 560 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 DSC2Q02487 901 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 PPP1R15BQ5SWA1 713 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 GBP7Q8N8V2 638 aaPredicted RBP13.57□□□□□ -0.24
CASC4-202ENST00000345795 SMIM14Q96QK8 99 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 APOL5Q9BWW9 433 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 SLC24A3Q9HC58 644 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 SIPA1L1O43166 1804 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 TP73O15350 636 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 EDF1O60869 148 aaKnown RBP13.57□□□□□ -0.24
CASC4-202ENST00000345795 CNTN5O94779 1100 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 ASMTLO95671 621 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 CYP2C18P33260 490 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 PKNOX1P55347 436 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 MGAT5Q09328 741 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 KPNB1Q14974 876 aaKnown RBP13.57□□□□□ -0.24
CASC4-202ENST00000345795 SH2D4BQ5SQS7 431 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 MFSD5Q6N075 450 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 TTC30BQ8N4P2 665 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 TRPV1Q8NER1 839 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 PPHLN1Q8NEY8 458 aaKnown RBP13.57□□□□□ -0.24
CASC4-202ENST00000345795 PIP4K2CQ8TBX8 421 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 TXLNGYQ9BZA5 131 aa13.57□□□□□ -0.24
CASC4-202ENST00000345795 ZMYND8Q9ULU4 1186 aaPredicted RBP13.57□□□□□ -0.24
CASC4-202ENST00000345795 PRR5-ARHGAP8B1AHC4 643 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 ITM2AO43736 263 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 ARHGAP8P85298 464 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 ART3Q13508 389 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 ZRANB3Q5FWF4 1079 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 MARC1Q5VT66 337 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 OTOP2Q7RTS6 562 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 C14orf80Q86SX3 495 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 SCN1AP35498 2009 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 CHADO15335 359 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 SLC1A6P48664 564 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 KCNQ1P51787 676 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 INCA1Q0VD86 236 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 UBXN11Q5T124 520 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 PACS1Q6VY07 963 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 SLC44A1Q8WWI5 657 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 PSMG2Q969U7 264 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 OSBPL1AQ9BXW6 950 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 OXCT2Q9BYC2 517 aaPredicted RBP13.56□□□□□ -0.24
CASC4-202ENST00000345795 CCSER2Q9H7U1 834 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 ANLNQ9NQW6 1124 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 KCTD3Q9Y597 815 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 J3KR12 359 aa13.56□□□□□ -0.24
CASC4-202ENST00000345795 OPHN1O60890 802 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms