RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 APOC1P02654 83 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 NME5P56597 212 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 MTMR12Q9C0I1 747 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 CKLFQ9UBR5 152 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 STX16-NPEPL1H3BU86 382 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 STX16O14662 325 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 MLYCDO95822 493 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 PARP6Q2NL67 630 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 KCTD21Q4G0X4 260 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 CDKAL1Q5VV42 579 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 FICDQ9BVA6 458 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 IKZF3Q9UKT9 509 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 CNTNAP5Q8WYK1 1306 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 SERPINA1P01009 418 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 SDC2P34741 201 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 DDX39BQ13838 428 aaKnown RBP19.68■□□□□ 0.74
HDAC4-201ENST00000345617 GLRA4Q5JXX5 417 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 DPP3Q9NY33 737 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 TUBA1BP68363 451 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 GPR162Q16538 588 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 TUBA1AQ71U36 451 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 CCDC167Q9P0B6 97 aa19.68■□□□□ 0.74
HDAC4-201ENST00000345617 ATP13A5Q4VNC0 1218 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 ERMARDQ5T6L9 678 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 PANX3Q96QZ0 392 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 ICE1Q9Y2F5 2266 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 VDRP11473 427 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 PRDX5P30044 214 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 PDIA6Q15084 440 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 GIPC3Q8TF64 312 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 M0QYT0 321 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 PRG2P13727 222 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 BCL2L14Q9BZR8 327 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 EPB41L1Q9H4G0 881 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 MAP1BP46821 2468 aaKnown RBP19.67■□□□□ 0.74
HDAC4-201ENST00000345617 GALNT3Q14435 633 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 C2orf69Q8N8R5 385 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 TMEM143Q96AN5 459 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 KBTBD4Q9NVX7 518 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 REM1O75628 298 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 SMYD1Q8NB12 490 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 PHF10Q8WUB8 498 aaKnown RBP19.67■□□□□ 0.74
HDAC4-201ENST00000345617 STOX2Q9P2F5 926 aaPredicted RBP19.67■□□□□ 0.74
HDAC4-201ENST00000345617 CDH4P55283 916 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 RIPK1Q13546 671 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 PROSER1Q86XN7 944 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 OR6J1Q8NGC5 347 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 SEPT5Q99719 369 aaPredicted RBP19.67■□□□□ 0.74
HDAC4-201ENST00000345617 SLC2A4P14672 509 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 SPOCD1Q6ZMY3 1216 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 TCAIMQ8N3R3 496 aa19.67■□□□□ 0.74
HDAC4-201ENST00000345617 DNAJA2O60884 412 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 ITGA4P13612 1032 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 GSSP48637 474 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 MFSD4BQ5TF39 518 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 PNPT1Q8TCS8 783 aaKnown RBP19.66■□□□□ 0.74
HDAC4-201ENST00000345617 MED8Q96G25 268 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 PCDHA3Q9Y5H8 950 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 SERPINF2P08697 491 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 MAPTP10636 758 aaKnown RBP19.66■□□□□ 0.74
HDAC4-201ENST00000345617 CPT1AP50416 773 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 CYP4F12Q9HCS2 524 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 PLOD3O60568 738 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 TMEM132BQ14DG7 1078 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 RBM44Q6ZP01 1051 aaKnown RBP19.66■□□□□ 0.74
HDAC4-201ENST00000345617 ANKRD13AQ8IZ07 590 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 MAGEE2Q8TD90 523 aaPredicted RBP19.66■□□□□ 0.74
HDAC4-201ENST00000345617 MCOLN3Q8TDD5 553 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 ATG4AQ8WYN0 398 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 CLCC1Q96S66 551 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 CARD8Q9Y2G2 431 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 FOXN3O00409 490 aaPredicted RBP19.66■□□□□ 0.74
HDAC4-201ENST00000345617 LRIG2O94898 1065 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 ITGA11Q9UKX5 1188 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 MTF2Q9Y483 593 aaPredicted RBP19.66■□□□□ 0.74
HDAC4-201ENST00000345617 CHST10O43529 356 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 HBP1O60381 514 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 CPSF4O95639 269 aaKnown RBP19.66■□□□□ 0.74
HDAC4-201ENST00000345617 CCNIQ14094 377 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 SPAG16Q8N0X2 631 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 LZTR1Q8N653 840 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 TATDN2Q93075 761 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 NACC2Q96BF6 587 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 CLTCQ00610 1675 aaKnown RBP19.66■□□□□ 0.74
HDAC4-201ENST00000345617 POLRMTO00411 1230 aaKnown RBP19.66■□□□□ 0.74
HDAC4-201ENST00000345617 GNB5O14775 395 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 FGRP09769 529 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 ACTL9Q8TC94 416 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 CD101Q93033 1021 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 ENTPD4Q9Y227 616 aa19.66■□□□□ 0.74
HDAC4-201ENST00000345617 CPS1P31327 1500 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 TXNP10599 105 aaKnown RBP19.65■□□□□ 0.74
HDAC4-201ENST00000345617 HERVK_113P62684 666 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 PHACTR4Q8IZ21 702 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 ARHGEF33A8MVX0 844 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 PLET1Q6UQ28 207 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 SIX5Q8N196 739 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 ATPIF1Q9UII2 106 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 PPLO60437 1756 aa19.65■□□□□ 0.74
HDAC4-201ENST00000345617 ITGB6P18564 788 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms