RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 COPS5Q92905 334 aa18.16■□□□□ 0.5
VHL-202ENST00000345392 SPATA13Q96N96 652 aa18.16■□□□□ 0.5
VHL-202ENST00000345392 AGAP3Q96P47 875 aa18.16■□□□□ 0.5
VHL-202ENST00000345392 AP4E1Q9UPM8 1137 aa18.16■□□□□ 0.5
VHL-202ENST00000345392 C7orf72A4D263 438 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 PAPSS1O43252 624 aaPredicted RBP18.15■□□□□ 0.5
VHL-202ENST00000345392 GABBR2O75899 941 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 CSPG5O95196 566 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 JUNP05412 331 aaKnown RBP18.15■□□□□ 0.5
VHL-202ENST00000345392 DESP17661 470 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 PSMC3P17980 439 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 GARSP41250 739 aaKnown RBP18.15■□□□□ 0.5
VHL-202ENST00000345392 NUMBP49757 651 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 SLC6A3Q01959 620 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 TRIML2Q8N7C3 387 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 RP9Q8TA86 221 aaKnown RBP18.15■□□□□ 0.5
VHL-202ENST00000345392 CXorf38Q8TB03 319 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 NLRP7Q8WX94 980 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 ATP6V1E2Q96A05 226 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 EME1Q96AY2 570 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 NPAS2Q99743 824 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 LPIN3Q9BQK8 851 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 ILKAPQ9H0C8 392 aaPredicted RBP18.15■□□□□ 0.5
VHL-202ENST00000345392 GGA3Q9NZ52 723 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 BARX2Q9UMQ3 279 aaPredicted RBP18.15■□□□□ 0.5
VHL-202ENST00000345392 PRSS51A0A1B0GVH4 220 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 ZBTB42B2RXF5 422 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 MATN2O00339 956 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 ACKR2O00590 384 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 POLBP06746 335 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 MLNP12872 115 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 FGFR3P22607 806 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 ME2P23368 584 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 SERPINB8P50452 374 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 ART3Q13508 389 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 IL23RQ5VWK5 629 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 TTC30AQ86WT1 665 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 NUP93Q8N1F7 819 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 TMEM102Q8N9M5 508 aaPredicted RBP18.15■□□□□ 0.5
VHL-202ENST00000345392 TRPM4Q8TD43 1214 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 CCT7Q99832 543 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 VPS33BQ9H267 617 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 RNF11Q9Y3C5 154 aa18.15■□□□□ 0.5
VHL-202ENST00000345392 DPYSL4O14531 572 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 STAG3L1P0CL83 205 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 SAT1P21673 171 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 ICAM3P32942 547 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 DPYSL2Q16555 572 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 ACBD5Q5T8D3 534 aaPredicted RBP18.14■□□□□ 0.49
VHL-202ENST00000345392 TSPAN14Q8NG11 270 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 RIN3Q8TB24 985 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 NMRAL1Q9HBL8 299 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 SH3BP1Q9Y3L3 701 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 RNF103O00237 685 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 HNRNPCP07910 306 aaKnown RBP eCLIP18.14■□□□□ 0.495e-9■□□□□ 9.5
VHL-202ENST00000345392 PHKA2P46019 1235 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 NR2C2P49116 596 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 MXD4Q14582 209 aaPredicted RBP18.14■□□□□ 0.49
VHL-202ENST00000345392 GRTP1Q5TC63 336 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 SEL1L3Q68CR1 1132 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 TRIM67Q6ZTA4 783 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 ACOT1Q86TX2 421 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 CCNYQ8ND76 341 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 ZNF669Q96BR6 464 aaPredicted RBP18.14■□□□□ 0.49
VHL-202ENST00000345392 PLEKHG4BQ96PX9 1271 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 RBBP8Q99708 897 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 CPNE1Q99829 537 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 ZDHHC2Q9UIJ5 367 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 ZNF510Q9Y2H8 683 aa18.14■□□□□ 0.49
VHL-202ENST00000345392 TK2O00142 265 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 C2P06681 752 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 ZNF26P17031 533 aaPredicted RBP18.13■□□□□ 0.49
VHL-202ENST00000345392 EML3Q32P44 896 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 USP41Q3LFD5 358 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 MGAT5BQ3V5L5 792 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 ARL13AQ5H913 290 aaPredicted RBP18.13■□□□□ 0.49
VHL-202ENST00000345392 FAM160B1Q5W0V3 765 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 KLHL35Q6PF15 583 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 RBM12BQ8IXT5 1001 aaKnown RBP18.13■□□□□ 0.49
VHL-202ENST00000345392 PGAM4Q8N0Y7 254 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 OR52K1Q8NGK4 314 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 SEPT1Q8WYJ6 367 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 P2RY11Q96G91 374 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 CPB2Q96IY4 423 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 CNDP1Q96KN2 507 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 SLC2A11Q9BYW1 496 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 CAAP1Q9H8G2 361 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 COQ10BQ9H8M1 238 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 HOXC10Q9NYD6 342 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 EPS15L1Q9UBC2 864 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 RSL24D1Q9UHA3 163 aaKnown RBP18.13■□□□□ 0.49
VHL-202ENST00000345392 TDRKHQ9Y2W6 561 aaKnown RBP18.13■□□□□ 0.49
VHL-202ENST00000345392 ANK1P16157 1881 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 KPNA7A9QM74 516 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 GOLGA8TH3BQL2 631 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 HDAC3O15379 428 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 BCAS2O75934 225 aaPredicted RBP18.13■□□□□ 0.49
VHL-202ENST00000345392 PIGNO95427 931 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 CCDC130P13994 396 aa18.13■□□□□ 0.49
VHL-202ENST00000345392 TFEBP19484 476 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms